RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 FMR1NBQ8N0W7 255 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-201ENST00000339754 USP28Q96RU2 1077 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 PRR36Q9H6K5 1346 aa10.92□□□□□ -0.66
NECAP1-201ENST00000339754 A0A1B0GUL7 405 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 MAGEA9P43362 315 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 PTPRUQ92729 1446 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 VWA3AA6NCI4 1184 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 NRDCO43847 1150 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 RPS6KA5O75582 802 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
NECAP1-201ENST00000339754 SECISBP2LQ93073 1101 aaKnown RBP10.91□□□□□ -0.66
NECAP1-201ENST00000339754 MPHOSPH8Q99549 860 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 PHAXQ9H814 394 aaKnown RBP10.91□□□□□ -0.66
NECAP1-201ENST00000339754 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
NECAP1-201ENST00000339754 LONRF2Q1L5Z9 754 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 SMARCC2Q8TAQ2 1214 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 KIAA1468Q9P260 1216 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 MON2Q7Z3U7 1717 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 IVLP07476 585 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 WDR24Q96S15 920 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
NECAP1-201ENST00000339754 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
NECAP1-201ENST00000339754 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.67
NECAP1-201ENST00000339754 SLIT1O75093 1534 aa10.9□□□□□ -0.67
NECAP1-201ENST00000339754 NAA16Q6N069 864 aaPredicted RBP10.89□□□□□ -0.67
NECAP1-201ENST00000339754 NCAPGQ9BPX3 1015 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 HSD3B7Q9H2F3 369 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 ARHGAP23Q9P227 1491 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 NEDD4P46934 1319 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
NECAP1-201ENST00000339754 HIP1O00291 1037 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 FANCCQ00597 558 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 PPP2R3AQ06190 1150 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 TTC31Q49AM3 519 aaPredicted RBP10.89□□□□□ -0.67
NECAP1-201ENST00000339754 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
NECAP1-201ENST00000339754 ATL3Q6DD88 541 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 PCDHA7Q9UN72 937 aa10.89□□□□□ -0.67
NECAP1-201ENST00000339754 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 ME1P48163 572 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 PSEN1P49768 467 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 SCRN1Q12765 414 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 LEKR1Q6ZMV7 388 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 TMEM139Q8IV31 216 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 FMNL2Q96PY5 1086 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 HMG20BQ9P0W2 317 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 JCADQ9P266 1359 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 PEAK1Q9H792 1746 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 ATP1A3P13637 1013 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 TXLNAP40222 546 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 BRD3Q15059 726 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 DPF2Q92785 391 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 GPATCH3Q96I76 525 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 VPS18Q9P253 973 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 PPP2R2CQ9Y2T4 447 aa10.88□□□□□ -0.67
NECAP1-201ENST00000339754 RIMS1Q86UR5 1692 aaKnown RBP10.88□□□□□ -0.67
NECAP1-201ENST00000339754 A0A1B0GVL5 298 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 ZSCAN12O43309 604 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 LMOD1P29536 600 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 NDUFA8P51970 172 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 NLRP12P59046 1061 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 MTX1Q13505 466 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 BEND3Q5T5X7 828 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 Q6ZUG5 572 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 ZNF589Q86UQ0 364 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 FAM177A1Q8N128 213 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 HNRNPLLQ8WVV9 542 aaKnown RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 KIFC2Q96AC6 838 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 PDE11AQ9HCR9 933 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 TAF5LO75529 589 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 CTDNEP1O95476 244 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 CORO7P57737 925 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 GNG11P61952 73 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms