RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
LITAF-201ENST00000339430 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
LITAF-201ENST00000339430 RTCBQ9Y3I0 505 aaKnown RBP19.39■□□□□ 0.69
LITAF-201ENST00000339430 PCCAP05165 728 aaPredicted RBP19.39■□□□□ 0.69
LITAF-201ENST00000339430 SLFNL1Q499Z3 407 aa19.39■□□□□ 0.69
LITAF-201ENST00000339430 SLC27A3Q5K4L6 730 aa19.39■□□□□ 0.69
LITAF-201ENST00000339430 APBA3O96018 575 aa19.38■□□□□ 0.69
LITAF-201ENST00000339430 CDC37L1Q7L3B6 337 aa19.38■□□□□ 0.69
LITAF-201ENST00000339430 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
LITAF-201ENST00000339430 AK7Q96M32 723 aa19.38■□□□□ 0.69
LITAF-201ENST00000339430 TIMM10P62072 90 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 TXNRD1Q16881 649 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 FAM173BQ6P4H8 233 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 PROM2Q8N271 834 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 ZNF594Q96JF6 807 aaPredicted RBP19.37■□□□□ 0.69
LITAF-201ENST00000339430 HAUS7Q99871 368 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 TRMT112Q9UI30 125 aaKnown RBP19.37■□□□□ 0.69
LITAF-201ENST00000339430 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 HMG20BQ9P0W2 317 aa19.37■□□□□ 0.69
LITAF-201ENST00000339430 ATG9AQ7Z3C6 839 aa19.36■□□□□ 0.69
LITAF-201ENST00000339430 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
LITAF-201ENST00000339430 ZNF652Q9Y2D9 606 aa19.36■□□□□ 0.69
LITAF-201ENST00000339430 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
LITAF-201ENST00000339430 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.36■□□□□ 0.69
LITAF-201ENST00000339430 GOLIM4O00461 696 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 SUSD4Q5VX71 490 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 ARHGEF1Q92888 912 aaKnown RBP19.35■□□□□ 0.69
LITAF-201ENST00000339430 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
LITAF-201ENST00000339430 MCMDC2Q4G0Z9 681 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 HS1BP3Q53T59 392 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 NEK1Q96PY6 1258 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 NARFQ9UHQ1 456 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 NOL7Q9UMY1 257 aaKnown RBP19.35■□□□□ 0.69
LITAF-201ENST00000339430 BCORQ6W2J9 1755 aa19.35■□□□□ 0.69
LITAF-201ENST00000339430 PLSCR1O15162 318 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 TSGA10IPQ3SY00 556 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 ZPR1O75312 459 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 CYP21A2P08686 494 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 HCLS1P14317 486 aaPredicted RBP19.34■□□□□ 0.69
LITAF-201ENST00000339430 TRAPPC3LQ5T215 181 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 GIMAP6Q6P9H5 292 aa19.34■□□□□ 0.69
LITAF-201ENST00000339430 CSPP1Q1MSJ5 1256 aa19.33■□□□□ 0.69
LITAF-201ENST00000339430 KBTBD3Q8NAB2 608 aa19.33■□□□□ 0.69
LITAF-201ENST00000339430 BCL2L12Q9HB09 334 aa19.33■□□□□ 0.69
LITAF-201ENST00000339430 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
LITAF-201ENST00000339430 HSP90B1P14625 803 aaKnown RBP19.33■□□□□ 0.68
LITAF-201ENST00000339430 KRT32Q14532 448 aa19.33■□□□□ 0.68
LITAF-201ENST00000339430 Q6ZUG5 572 aa19.33■□□□□ 0.68
LITAF-201ENST00000339430 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.68
LITAF-201ENST00000339430 IRS4O14654 1257 aaPredicted RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 JAK2O60674 1132 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 RFC4P35249 363 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 PARP10Q53GL7 1025 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 MPNDQ8N594 471 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 ALDH8A1Q9H2A2 487 aaPredicted RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 U3KPZ7 1027 aaPredicted RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 TTC6Q86TZ1 520 aa19.32■□□□□ 0.68
LITAF-201ENST00000339430 CCDC85AQ96PX6 553 aaPredicted RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
LITAF-201ENST00000339430 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
LITAF-201ENST00000339430 PTMAP06454 111 aaKnown RBP19.31■□□□□ 0.68
LITAF-201ENST00000339430 PDCP20941 246 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 USP25Q9UHP3 1055 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 LAMA4Q16363 1823 aa19.31■□□□□ 0.68
LITAF-201ENST00000339430 IL15P40933 162 aaPredicted RBP19.3■□□□□ 0.68
LITAF-201ENST00000339430 KRT85P78386 507 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 TBC1D9BQ66K14 1250 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 SH3TC1Q8TE82 1336 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 RFX7Q2KHR2 1363 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 LETM1O95202 739 aaPredicted RBP19.3■□□□□ 0.68
LITAF-201ENST00000339430 STOX1Q6ZVD7 989 aa19.3■□□□□ 0.68
LITAF-201ENST00000339430 TFIP11Q9UBB9 837 aaKnown RBP19.3■□□□□ 0.68
LITAF-201ENST00000339430 A0A0G2JLW4 131 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 A0A1B0GUL7 405 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 EYA2O00167 538 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 GTF3C6Q969F1 213 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 C4AP0C0L4 1744 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 TNS1Q9HBL0 1735 aaKnown RBP19.29■□□□□ 0.68
LITAF-201ENST00000339430 RGL2O15211 777 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 NTSR2O95665 410 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 IFIT1P09914 478 aaKnown RBP19.29■□□□□ 0.68
LITAF-201ENST00000339430 FGD1P98174 961 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 FAM184AQ8NB25 1140 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 BRF1Q92994 677 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 DDX11Q96FC9 970 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 UBR3Q6ZT12 1888 aa19.29■□□□□ 0.68
LITAF-201ENST00000339430 CSF1RP07333 972 aa19.28■□□□□ 0.68
LITAF-201ENST00000339430 ADRA2BP18089 450 aa19.28■□□□□ 0.68
LITAF-201ENST00000339430 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
LITAF-201ENST00000339430 PDE8AO60658 829 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms