RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PIH1D3Q9NQM4 214 aaKnown RBP8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 LIMCH1Q9UPQ0 1083 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 RPS6KA4O75676 772 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 FGFR2P21802 821 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 FAM196AQ6ZSG2 479 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 CHST3Q7LGC8 479 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 PPFIA3O75145 1194 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 MCM2P49736 904 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 HAND2P61296 217 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 STK3Q13188 491 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 TOB2Q14106 344 aaPredicted RBP8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 CCDC152Q4G0S7 254 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 CELF1Q92879 486 aaKnown RBP8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 CWC22Q9HCG8 908 aaKnown RBP8.86□□□□□ -0.99
SRFBP1-201ENST00000339397 ABCC12Q96J65 1359 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 RPAP1Q9BWH6 1393 aaPredicted RBP8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 MYH3P11055 1940 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 IDH1O75874 414 aaKnown RBP8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 TRIM37O94972 964 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 CHRNDQ07001 517 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 DENND2AQ9ULE3 1009 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 BTAF1O14981 1849 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 PUM3Q15397 648 aaKnown RBP8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 SLC9C2Q5TAH2 1124 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 TM6SF1Q9BZW5 370 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 GDPD2Q9HCC8 539 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 HMG20BQ9P0W2 317 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 WWC3Q9ULE0 1092 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
SRFBP1-201ENST00000339397 ZPR1O75312 459 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 RPS6KB1P23443 525 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 NUCB2P80303 420 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 BLOC1S2Q6QNY1 142 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 LPIN2Q92539 896 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 GBP4Q96PP9 640 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 SETDB2Q96T68 719 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 HELLSQ9NRZ9 838 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 MYO5AQ9Y4I1 1855 aaKnown RBP8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 KLRK1P26718 216 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 RNF20Q5VTR2 975 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 NBPF5PQ86XG9 351 aaPredicted RBP8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 INTS4Q96HW7 963 aaKnown RBP8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 NEK1Q96PY6 1258 aa8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
SRFBP1-201ENST00000339397 THSD7AQ9UPZ6 1657 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 BRD1O95696 1058 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 FGAP02671 866 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 IGHMBP2P38935 993 aaKnown RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 GYG1P46976 350 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 RC3H1Q5TC82 1133 aaKnown RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.83□□□□□ -1
SRFBP1-201ENST00000339397 NSFL1CQ9UNZ2 370 aaKnown RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 MROH5Q6ZUA9 1318 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 AKAP11Q9UKA4 1901 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 PROM2Q8N271 834 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 AK7Q96M32 723 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 INCENPQ9NQS7 918 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 RREB1Q92766 1687 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 GPAA1O43292 621 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 SYT1P21579 422 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 RFC4P35249 363 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 CLEC17AQ6ZS10 378 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 Q6ZUG5 572 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 SPATA5Q8NB90 893 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 LMBRD1Q9NUN5 540 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 MINPP1Q9UNW1 487 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 U3KPZ7 1027 aaPredicted RBP8.83□□□□□ -1
SRFBP1-201ENST00000339397 ZNF532Q9HCE3 1301 aa8.83□□□□□ -1
SRFBP1-201ENST00000339397 ATRNO75882 1429 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
SRFBP1-201ENST00000339397 E7EWF7 191 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 PSMA5P28066 241 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 GJB2P29033 226 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
SRFBP1-201ENST00000339397 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
SRFBP1-201ENST00000339397 SLC5A1P13866 664 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 ADD2P35612 726 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 NFIXQ14938 502 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 SF3B3Q15393 1217 aaKnown RBP8.82□□□□□ -1
SRFBP1-201ENST00000339397 APPBP2Q92624 585 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 BRF1Q92994 677 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 DSCC1Q9BVC3 393 aa8.82□□□□□ -1
SRFBP1-201ENST00000339397 RFX7Q2KHR2 1363 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 SMIM22K7EJ46 135 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms