RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 FAM107BQ9H098 131 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 CCDC196A0A1B0GTZ2 297 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 FOXR1Q6PIV2 292 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 PTPRUQ92729 1446 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 MPHOSPH10O00566 681 aaKnown RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 NR1I2O75469 434 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 SSR1P43307 286 aaKnown RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 CEBPAP49715 358 aaPredicted RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 TADA2BQ86TJ2 420 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 EFCAB13Q8IY85 973 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 AOPEPQ8N6M6 819 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 KAZALD1Q96I82 304 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 A0A0D9SFI3 127 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 PPP2R3AQ06190 1150 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 HDGFL1Q5TGJ6 251 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 CC2D1AQ6P1N0 951 aaPredicted RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 PPP1R13BQ96KQ4 1090 aa10.73□□□□□ -0.69
RPGR-202ENST00000339363 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
RPGR-202ENST00000339363 ETF1P62495 437 aaKnown RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 EGFL6Q8IUX8 553 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 SMARCC1Q92922 1105 aaPredicted RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 CCDC8Q9H0W5 538 aaPredicted RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 PIP4K2AP48426 406 aaPredicted RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 TDRD7Q8NHU6 1098 aaKnown RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 EFCAB8A8MWE9 144 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 EBAG9O00559 213 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
RPGR-202ENST00000339363 NFATC2IPQ8NCF5 419 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 KDRP35968 1356 aa10.72□□□□□ -0.69
RPGR-202ENST00000339363 A0A087WUV0 522 aaPredicted RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 ATP8B1O43520 1251 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 GNAI3P08754 354 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 NECTIN1Q15223 517 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 STX1AQ16623 288 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 LONRF2Q1L5Z9 754 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 CEP57Q86XR8 500 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 CALR3Q96L12 384 aaKnown RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 SIL1Q9H173 461 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 RBM28Q9NW13 759 aaKnown RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 ADCY9O60503 1353 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 FRMD3A2A2Y4 597 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 PDCP20941 246 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 AMPHP49418 695 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 MAP2K1Q02750 393 aaPredicted RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 FAM43BQ6ZT52 329 aaPredicted RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 RNF217Q8TC41 542 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 GOLGA1Q92805 767 aa10.71□□□□□ -0.69
RPGR-202ENST00000339363 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.69
RPGR-202ENST00000339363 PLEKHG2Q9H7P9 1386 aa10.71□□□□□ -0.7
RPGR-202ENST00000339363 ITSN1Q15811 1721 aa10.71□□□□□ -0.7
RPGR-202ENST00000339363 TOB2Q14106 344 aaPredicted RBP10.71□□□□□ -0.7
RPGR-202ENST00000339363 CCDC150Q8NCX0 1101 aa10.71□□□□□ -0.7
RPGR-202ENST00000339363 CNNM3Q8NE01 707 aa10.71□□□□□ -0.7
RPGR-202ENST00000339363 LRRC59Q96AG4 307 aaKnown RBP10.71□□□□□ -0.7
RPGR-202ENST00000339363 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.7
RPGR-202ENST00000339363 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.7
RPGR-202ENST00000339363 USP31Q70CQ4 1352 aa10.71□□□□□ -0.7
RPGR-202ENST00000339363 SRCAPQ6ZRS2 3230 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 GNAT3A8MTJ3 354 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 SASH1O94885 1247 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 TBC1D8O95759 1140 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 SERPINC1P01008 464 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 CDR1P51861 262 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 NMIQ13287 307 aaPredicted RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 PTPN21Q16825 1174 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 CCDC129Q6ZRS4 1044 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 HDXQ7Z353 690 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 GPR161Q8N6U8 529 aaKnown RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 UTP14AQ9BVJ6 771 aaKnown RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 SASH3O75995 380 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 SCP2P22307 547 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 EIF5P55010 431 aaKnown RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 TICAM2Q86XR7 235 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 CCDC12Q8WUD4 166 aaPredicted RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 PARD6BQ9BYG5 372 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 MED4Q9NPJ6 270 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 IFNKQ9P0W0 207 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 CCDC9Q9Y3X0 531 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms