RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OSBP2Q969R2 916 aa26.88■■□□□ 1.89
PDLIM2-203ENST00000339162 TAF1P21675 1872 aa26.88■■□□□ 1.89
PDLIM2-203ENST00000339162 CYP2E1P05181 493 aaPredicted RBP26.87■■□□□ 1.89
PDLIM2-203ENST00000339162 SLC10A5Q5PT55 438 aa26.87■■□□□ 1.89
PDLIM2-203ENST00000339162 CYP46A1Q9Y6A2 500 aa26.87■■□□□ 1.89
PDLIM2-203ENST00000339162 WTIPA6NIX2 430 aaPredicted RBP26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 WASHC4Q2M389 1173 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 TPTE2Q6XPS3 522 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 ANKRD18AQ8IVF6 992 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 CELF1Q92879 486 aaKnown RBP26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 PDRG1Q9NUG6 133 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 MCM4P33991 863 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 TM6SF1Q9BZW5 370 aa26.86■■□□□ 1.89
PDLIM2-203ENST00000339162 NPHP1O15259 732 aa26.85■■□□□ 1.89
PDLIM2-203ENST00000339162 CUL4AQ13619 759 aa26.85■■□□□ 1.89
PDLIM2-203ENST00000339162 TCEANC2Q96MN5 208 aa26.85■■□□□ 1.89
PDLIM2-203ENST00000339162 ZNF512BQ96KM6 892 aaPredicted RBP26.85■■□□□ 1.89
PDLIM2-203ENST00000339162 NLRP3Q96P20 1036 aa26.85■■□□□ 1.89
PDLIM2-203ENST00000339162 ARID4AP29374 1257 aaPredicted RBP26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 CWC22Q9HCG8 908 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 PIH1D3Q9NQM4 214 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 C4AP0C0L4 1744 aa26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 AKAP11Q9UKA4 1901 aa26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 BCAMP50895 628 aa26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 RBM6P78332 1123 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 U3KPZ7 1027 aaPredicted RBP26.84■■□□□ 1.89
PDLIM2-203ENST00000339162 RPAP1Q9BWH6 1393 aaPredicted RBP26.83■■□□□ 1.89
PDLIM2-203ENST00000339162 CYP21A2P08686 494 aa26.83■■□□□ 1.89
PDLIM2-203ENST00000339162 NFIXQ14938 502 aa26.83■■□□□ 1.89
PDLIM2-203ENST00000339162 HMG20BQ9P0W2 317 aa26.83■■□□□ 1.89
PDLIM2-203ENST00000339162 HSPD1P10809 573 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 PUS7LQ9H0K6 701 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 A0A0G2JLW4 131 aa26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 IDH1O75874 414 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 UQCRFS1P1P0C7P4 283 aa26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 RASGRF1Q13972 1273 aa26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 ZNF772Q68DY9 489 aaPredicted RBP26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 LIMCH1Q9UPQ0 1083 aa26.82■■□□□ 1.88
PDLIM2-203ENST00000339162 PSMA5P28066 241 aa26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 TICAM2Q86XR7 235 aa26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 PROM2Q8N271 834 aa26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 LARGE1O95461 756 aa26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 LRRFIP1Q32MZ4 808 aaKnown RBP26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 SPATA5Q8NB90 893 aa26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 BSDC1Q9NW68 430 aaPredicted RBP26.81■■□□□ 1.88
PDLIM2-203ENST00000339162 ZFYP08048 801 aaPredicted RBP26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 SLC27A3Q5K4L6 730 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 SLC9C2Q5TAH2 1124 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 BLOC1S2Q6QNY1 142 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 CASZ1Q86V15 1759 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 COL24A1Q17RW2 1714 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 DSCC1Q9BVC3 393 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 MINPP1Q9UNW1 487 aa26.8■■□□□ 1.88
PDLIM2-203ENST00000339162 DTNBO60941 627 aa26.79■■□□□ 1.88
PDLIM2-203ENST00000339162 TXNRD1Q16881 649 aa26.79■■□□□ 1.88
PDLIM2-203ENST00000339162 TSGA10IPQ3SY00 556 aa26.79■■□□□ 1.88
PDLIM2-203ENST00000339162 APPBP2Q92624 585 aa26.79■■□□□ 1.88
PDLIM2-203ENST00000339162 IQSEC3Q9UPP2 1182 aaPredicted RBP26.79■■□□□ 1.88
PDLIM2-203ENST00000339162 TTF1Q15361 905 aaPredicted RBP26.78■■□□□ 1.88
PDLIM2-203ENST00000339162 INTS4Q96HW7 963 aaKnown RBP26.78■■□□□ 1.88
PDLIM2-203ENST00000339162 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.78■■□□□ 1.88
PDLIM2-203ENST00000339162 NUCB2P80303 420 aa26.78■■□□□ 1.88
PDLIM2-203ENST00000339162 ADRA2BP18089 450 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 RPS8P62241 208 aaKnown RBP26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 FOXD4L5Q5VV16 416 aaPredicted RBP26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 TTLL5Q6EMB2 1281 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 IL27Q8NEV9 243 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 FOXD4L4Q8WXT5 416 aaPredicted RBP26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 WWC3Q9ULE0 1092 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 CARMIL3Q8ND23 1372 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 ARAP2Q8WZ64 1704 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 GYS1P13807 737 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 RPS6KB1P23443 525 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 ADD2P35612 726 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 ZDHHC9Q9Y397 364 aa26.77■■□□□ 1.88
PDLIM2-203ENST00000339162 FOXP2O15409 715 aa26.76■■□□□ 1.87
PDLIM2-203ENST00000339162 GYG1P46976 350 aa26.76■■□□□ 1.87
PDLIM2-203ENST00000339162 STOX1Q6ZVD7 989 aa26.76■■□□□ 1.87
PDLIM2-203ENST00000339162 MYO5AQ9Y4I1 1855 aaKnown RBP26.76■■□□□ 1.87
PDLIM2-203ENST00000339162 NEK1Q96PY6 1258 aa26.75■■□□□ 1.87
PDLIM2-203ENST00000339162 UBR3Q6ZT12 1888 aa26.75■■□□□ 1.87
PDLIM2-203ENST00000339162 TM4SF1P30408 202 aa26.75■■□□□ 1.87
PDLIM2-203ENST00000339162 CNBD1Q8NA66 436 aa26.75■■□□□ 1.87
PDLIM2-203ENST00000339162 TPCN1Q9ULQ1 816 aa26.75■■□□□ 1.87
PDLIM2-203ENST00000339162 GPAA1O43292 621 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 KRT32Q14532 448 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 GBP4Q96PP9 640 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 ZNF532Q9HCE3 1301 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 ME3Q16798 604 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 SLC51AQ86UW1 340 aa26.74■■□□□ 1.87
PDLIM2-203ENST00000339162 PDE6AP16499 860 aa26.73■■□□□ 1.87
PDLIM2-203ENST00000339162 ZSCAN25Q6NSZ9 544 aa26.73■■□□□ 1.87
PDLIM2-203ENST00000339162 CCDC83Q8IWF9 413 aa26.73■■□□□ 1.87
PDLIM2-203ENST00000339162 NECAB1Q8N987 351 aa26.73■■□□□ 1.87
PDLIM2-203ENST00000339162 DEKP35659 375 aaKnown RBP26.72■■□□□ 1.87
PDLIM2-203ENST00000339162 TOB2Q14106 344 aaPredicted RBP26.72■■□□□ 1.87
PDLIM2-203ENST00000339162 TNRC6CQ9HCJ0 1690 aaKnown RBP26.72■■□□□ 1.87
PDLIM2-203ENST00000339162 APBA3O96018 575 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 KLRK1P26718 216 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms