RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 TRIOBPQ9H2D6 2365 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 PODNQ7Z5L7 613 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
TBCCD1-201ENST00000338733 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
TBCCD1-201ENST00000338733 BMP8BP34820 402 aa11.83□□□□□ -0.52
TBCCD1-201ENST00000338733 PRDM6Q9NQX0 595 aa11.83□□□□□ -0.52
TBCCD1-201ENST00000338733 PSME4Q14997 1843 aa11.83□□□□□ -0.52
TBCCD1-201ENST00000338733 USP17L3A6NCW0 530 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 USP17L4A6NCW7 530 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 USP17L1Q7RTZ2 530 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 MYL6BP14649 208 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 PRKAR2BP31323 418 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 MCM10Q7L590 875 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 TRMT112Q9UI30 125 aaKnown RBP11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
TBCCD1-201ENST00000338733 SOX1O00570 391 aaPredicted RBP11.81□□□□□ -0.52
TBCCD1-201ENST00000338733 KIAA0100Q14667 2235 aaKnown RBP11.81□□□□□ -0.52
TBCCD1-201ENST00000338733 OGFOD1Q8N543 542 aa11.81□□□□□ -0.52
TBCCD1-201ENST00000338733 SHISA4Q96DD7 197 aa11.81□□□□□ -0.52
TBCCD1-201ENST00000338733 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
TBCCD1-201ENST00000338733 WNT10BO00744 389 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 ZFYVE28Q9HCC9 887 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 GJA8P48165 433 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 PRAMEF18Q5VWM3 479 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 SCN9AQ15858 1988 aa11.8□□□□□ -0.52
TBCCD1-201ENST00000338733 WTIPA6NIX2 430 aaPredicted RBP11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 CUL9Q8IWT3 2517 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 GJB1P08034 283 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 KIF22Q14807 665 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 LRIT3Q3SXY7 679 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 C1orf115Q9H7X2 142 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
TBCCD1-201ENST00000338733 UFL1O94874 794 aa11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 EIF4G2P78344 907 aaKnown RBP eCLIP11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 CAP1Q01518 475 aa11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 ZBED3Q96IU2 234 aaPredicted RBP11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 MTMR10Q9NXD2 777 aa11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 PDIA6Q15084 440 aa11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 SUPT20HL1Q3ZLR7 823 aa11.78□□□□□ -0.52
TBCCD1-201ENST00000338733 ATP2B4P23634 1241 aa11.77□□□□□ -0.52
TBCCD1-201ENST00000338733 PTPN18Q99952 460 aa11.77□□□□□ -0.52
TBCCD1-201ENST00000338733 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
TBCCD1-201ENST00000338733 DACT2Q5SW24 774 aa11.77□□□□□ -0.53
TBCCD1-201ENST00000338733 STRIP1Q5VSL9 837 aa11.77□□□□□ -0.53
TBCCD1-201ENST00000338733 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
TBCCD1-201ENST00000338733 CFAP53Q96M91 514 aa11.77□□□□□ -0.53
TBCCD1-201ENST00000338733 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
TBCCD1-201ENST00000338733 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
TBCCD1-201ENST00000338733 HTTP42858 3142 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 XDHP47989 1333 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 HOXD10P28358 340 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 FAM109BQ6ICB4 259 aaPredicted RBP11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 SH3TC2Q8TF17 1288 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 GDF15Q99988 308 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 TAF1P21675 1872 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 GJA5P36382 358 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 PRKG1Q13976 671 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 TAF1CQ15572 869 aaPredicted RBP11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
TBCCD1-201ENST00000338733 MED23Q9ULK4 1368 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 EVI5O60447 810 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 GTF2A2P52657 109 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 ZMYND15Q9H091 742 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 LACTBP83111 547 aaPredicted RBP11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
TBCCD1-201ENST00000338733 TLR2O60603 784 aa11.73□□□□□ -0.53
TBCCD1-201ENST00000338733 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
TBCCD1-201ENST00000338733 UBXN2AP68543 259 aa11.73□□□□□ -0.53
TBCCD1-201ENST00000338733 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
TBCCD1-201ENST00000338733 COA1Q9GZY4 146 aa11.73□□□□□ -0.53
TBCCD1-201ENST00000338733 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms