RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CARMIL3Q8ND23 1372 aa19.47■□□□□ 0.71
HPS1-202ENST00000338546 UBR3Q6ZT12 1888 aa19.47■□□□□ 0.71
HPS1-202ENST00000338546 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
HPS1-202ENST00000338546 UPF3BQ9BZI7 483 aaKnown RBP19.47■□□□□ 0.71
HPS1-202ENST00000338546 RPAP1Q9BWH6 1393 aaPredicted RBP19.46■□□□□ 0.71
HPS1-202ENST00000338546 MCAMP43121 646 aa19.46■□□□□ 0.71
HPS1-202ENST00000338546 ZAP70P43403 619 aa19.46■□□□□ 0.71
HPS1-202ENST00000338546 RUFY3Q7L099 469 aa19.46■□□□□ 0.71
HPS1-202ENST00000338546 FRAT2O75474 233 aaPredicted RBP19.45■□□□□ 0.7
HPS1-202ENST00000338546 CASTP20810 708 aaKnown RBP19.45■□□□□ 0.7
HPS1-202ENST00000338546 CHRNDQ07001 517 aa19.45■□□□□ 0.7
HPS1-202ENST00000338546 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
HPS1-202ENST00000338546 SCARF1Q14162 830 aa19.45■□□□□ 0.7
HPS1-202ENST00000338546 JAKMIP1Q96N16 626 aaKnown RBP19.45■□□□□ 0.7
HPS1-202ENST00000338546 PLSCR1O15162 318 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 TRIM37O94972 964 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 AMIGO3Q86WK7 504 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 APPBP2Q92624 585 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 ZSCAN31Q96LW9 406 aaPredicted RBP19.44■□□□□ 0.7
HPS1-202ENST00000338546 LIMCH1Q9UPQ0 1083 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 MYH7P12883 1935 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 CASZ1Q86V15 1759 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
HPS1-202ENST00000338546 ZBTB22O15209 634 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
HPS1-202ENST00000338546 SEC62Q99442 399 aaKnown RBP19.44■□□□□ 0.7
HPS1-202ENST00000338546 PHKA1P46020 1223 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 CLEC17AQ6ZS10 378 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
HPS1-202ENST00000338546 PDRG1Q9NUG6 133 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 MAST3O60307 1309 aa19.43■□□□□ 0.7
HPS1-202ENST00000338546 CYP2E1P05181 493 aaPredicted RBP19.42■□□□□ 0.7
HPS1-202ENST00000338546 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
HPS1-202ENST00000338546 NFIXQ14938 502 aa19.42■□□□□ 0.7
HPS1-202ENST00000338546 ADCK5Q3MIX3 580 aa19.42■□□□□ 0.7
HPS1-202ENST00000338546 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
HPS1-202ENST00000338546 GBP4Q96PP9 640 aa19.42■□□□□ 0.7
HPS1-202ENST00000338546 ANKRD2Q9GZV1 360 aa19.42■□□□□ 0.7
HPS1-202ENST00000338546 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
HPS1-202ENST00000338546 PHF14O94880 888 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 HMGB1P09429 215 aaKnown RBP19.41■□□□□ 0.7
HPS1-202ENST00000338546 PTMSP20962 102 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 AK2P54819 239 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 TXNRD1Q16881 649 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 SPATA5Q8NB90 893 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 CTNNA3Q9UI47 895 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
HPS1-202ENST00000338546 A0A1B0GUL6 1792 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 HSPD1P10809 573 aaKnown RBP19.4■□□□□ 0.7
HPS1-202ENST00000338546 MCM4P33991 863 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 ADD2P35612 726 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 CCDC129Q6ZRS4 1044 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 GNL3LQ9NVN8 582 aaKnown RBP19.4■□□□□ 0.7
HPS1-202ENST00000338546 ZNF804BA4D1E1 1349 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 RXRBP28702 533 aa19.4■□□□□ 0.7
HPS1-202ENST00000338546 TNPO1Q92973 898 aaKnown RBP19.4■□□□□ 0.7
HPS1-202ENST00000338546 DDX11L8A8MPP1 907 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 CHGBP05060 677 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 GYS1P13807 737 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 RPS6KB1P23443 525 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 TM4SF1P30408 202 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 WASHC4Q2M389 1173 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 CNBD1Q8NA66 436 aa19.39■□□□□ 0.69
HPS1-202ENST00000338546 CELF1Q92879 486 aaKnown RBP19.39■□□□□ 0.69
HPS1-202ENST00000338546 M0R2C6 588 aa19.38■□□□□ 0.69
HPS1-202ENST00000338546 CYP21A2P08686 494 aa19.38■□□□□ 0.69
HPS1-202ENST00000338546 MAP3K12Q12852 859 aa19.38■□□□□ 0.69
HPS1-202ENST00000338546 NEK1Q96PY6 1258 aa19.38■□□□□ 0.69
HPS1-202ENST00000338546 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.38■□□□□ 0.69
HPS1-202ENST00000338546 SEMA3EO15041 775 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 NPHP1O15259 732 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 RASGRF1Q13972 1273 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 CAVIN4Q5BKX8 364 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 SLC9C2Q5TAH2 1124 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 PROM2Q8N271 834 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 ZGPATQ8N5A5 531 aaKnown RBP19.37■□□□□ 0.69
HPS1-202ENST00000338546 PIH1D3Q9NQM4 214 aaKnown RBP19.37■□□□□ 0.69
HPS1-202ENST00000338546 DOCK2Q92608 1830 aa19.37■□□□□ 0.69
HPS1-202ENST00000338546 PDS5AQ29RF7 1337 aaKnown RBP19.37■□□□□ 0.69
HPS1-202ENST00000338546 IGSF3O75054 1194 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
HPS1-202ENST00000338546 FLAD1Q8NFF5 587 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 PDE6AP16499 860 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 BCAMP50895 628 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 ST5P78524 1137 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 TMED8Q6PL24 325 aaPredicted RBP19.36■□□□□ 0.69
HPS1-202ENST00000338546 COL4A1P02462 1669 aa19.36■□□□□ 0.69
HPS1-202ENST00000338546 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
HPS1-202ENST00000338546 IDH1O75874 414 aaKnown RBP19.35■□□□□ 0.69
HPS1-202ENST00000338546 GRAPQ13588 217 aa19.35■□□□□ 0.69
HPS1-202ENST00000338546 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
HPS1-202ENST00000338546 GRAPLQ8TC17 118 aaPredicted RBP19.35■□□□□ 0.69
HPS1-202ENST00000338546 PUS7LQ9H0K6 701 aaKnown RBP19.35■□□□□ 0.69
HPS1-202ENST00000338546 RGPD3A6NKT7 1758 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms