RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ANKRD18BA2A2Z9 1011 aa27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 ZNF445P59923 1031 aa27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 AHDC1Q5TGY3 1603 aaPredicted RBP27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 EIF5P55010 431 aaKnown RBP27.49■■□□□ 1.99
CLPTM1-201ENST00000337392 FGD1P98174 961 aa27.49■■□□□ 1.99
CLPTM1-201ENST00000337392 MYH14Q7Z406 1995 aaKnown RBP27.49■■□□□ 1.99
CLPTM1-201ENST00000337392 PHKA1P46020 1223 aa27.49■■□□□ 1.99
CLPTM1-201ENST00000337392 DENND2AQ9ULE3 1009 aa27.49■■□□□ 1.99
CLPTM1-201ENST00000337392 WTIPA6NIX2 430 aaPredicted RBP27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 APOBRQ0VD83 1088 aa27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 RAB11FIP4Q86YS3 637 aa27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 C8orf37Q96NL8 207 aa27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 NCOA5Q9HCD5 579 aaKnown RBP27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 CCDC87Q9NVE4 849 aa27.48■■□□□ 1.99
CLPTM1-201ENST00000337392 CCT2P78371 535 aaKnown RBP27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 TSGA10IPQ3SY00 556 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 ZNF34Q8IZ26 560 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 PHLPP1O60346 1717 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 NKX2-3Q8TAU0 364 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 HELLSQ9NRZ9 838 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 AKAP2Q9Y2D5 859 aa27.47■■□□□ 1.99
CLPTM1-201ENST00000337392 SPATA31A5Q5VU36 1347 aa27.46■■□□□ 1.99
CLPTM1-201ENST00000337392 SPATA31A7Q8IWB4 1347 aa27.46■■□□□ 1.99
CLPTM1-201ENST00000337392 CDHR2Q9BYE9 1310 aa27.46■■□□□ 1.99
CLPTM1-201ENST00000337392 E7EWF7 191 aa27.46■■□□□ 1.99
CLPTM1-201ENST00000337392 VGLL2Q8N8G2 317 aa27.46■■□□□ 1.99
CLPTM1-201ENST00000337392 LTBP4Q8N2S1 1624 aa27.45■■□□□ 1.99
CLPTM1-201ENST00000337392 MYO5AQ9Y4I1 1855 aaKnown RBP27.45■■□□□ 1.99
CLPTM1-201ENST00000337392 PDE8AO60658 829 aa27.45■■□□□ 1.99
CLPTM1-201ENST00000337392 SCRN1Q12765 414 aa27.45■■□□□ 1.98
CLPTM1-201ENST00000337392 TFIP11Q9UBB9 837 aaKnown RBP27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 COL22A1Q8NFW1 1626 aaPredicted RBP27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 IDH1O75874 414 aaKnown RBP27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 BICDL1Q6ZP65 573 aa27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 PIH1D3Q9NQM4 214 aaKnown RBP27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 NIP7Q9Y221 180 aaKnown RBP eCLIP27.44■■□□□ 1.98
CLPTM1-201ENST00000337392 TAOK2Q9UL54 1235 aa27.43■■□□□ 1.98
CLPTM1-201ENST00000337392 RFX7Q2KHR2 1363 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 CAMTA2O94983 1202 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 PDE8BO95263 885 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 CCDC24Q8N4L8 307 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 GTF3C6Q969F1 213 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 LAMA4Q16363 1823 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 KRT32Q14532 448 aa27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 IQSEC3Q9UPP2 1182 aaPredicted RBP27.42■■□□□ 1.98
CLPTM1-201ENST00000337392 FGAP02671 866 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 CCDC102BQ68D86 513 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 DSCC1Q9BVC3 393 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 MBD3O95983 291 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 ANKRD1Q15327 319 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 LRSAM1Q6UWE0 723 aa27.41■■□□□ 1.98
CLPTM1-201ENST00000337392 ERVV-1B6SEH8 477 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 SLC9C2Q5TAH2 1124 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 WWC3Q9ULE0 1092 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 COL4A1P02462 1669 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 WNK3Q9BYP7 1800 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 C3orf67Q6ZVT6 689 aa27.4■■□□□ 1.98
CLPTM1-201ENST00000337392 ISY1Q9ULR0 285 aaKnown RBP27.39■■□□□ 1.98
CLPTM1-201ENST00000337392 MYH3P11055 1940 aa27.39■■□□□ 1.98
CLPTM1-201ENST00000337392 GPAA1O43292 621 aa27.39■■□□□ 1.98
CLPTM1-201ENST00000337392 DHX32Q7L7V1 743 aaKnown RBP27.39■■□□□ 1.98
CLPTM1-201ENST00000337392 NRAPQ86VF7 1730 aa27.39■■□□□ 1.97
CLPTM1-201ENST00000337392 NGLY1Q96IV0 654 aa27.38■■□□□ 1.97
CLPTM1-201ENST00000337392 INCENPQ9NQS7 918 aa27.38■■□□□ 1.97
CLPTM1-201ENST00000337392 ANKRD36CQ5JPF3 1778 aa27.38■■□□□ 1.97
CLPTM1-201ENST00000337392 AKAP11Q9UKA4 1901 aa27.38■■□□□ 1.97
CLPTM1-201ENST00000337392 GUCY1B3Q02153 619 aa27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 TTC6Q86TZ1 520 aa27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 CTDNEP1O95476 244 aa27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 UTP14AQ9BVJ6 771 aaKnown RBP27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 CEBPZQ03701 1054 aaKnown RBP27.37■■□□□ 1.97
CLPTM1-201ENST00000337392 EXOSC10Q01780 885 aaKnown RBP27.36■■□□□ 1.97
CLPTM1-201ENST00000337392 FAM43AQ8N2R8 423 aa27.36■■□□□ 1.97
CLPTM1-201ENST00000337392 STK11IPQ8N1F8 1099 aa27.36■■□□□ 1.97
CLPTM1-201ENST00000337392 FTOQ9C0B1 505 aaKnown RBP eCLIP27.36■■□□□ 1.97
CLPTM1-201ENST00000337392 TAF1P21675 1872 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 MPHOSPH8Q99549 860 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 THRAP3Q9Y2W1 955 aaKnown RBP27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 NWD2Q9ULI1 1742 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 BCAMP50895 628 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 APPBP2Q92624 585 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 FBXO3Q9UK99 471 aa27.35■■□□□ 1.97
CLPTM1-201ENST00000337392 ZNF532Q9HCE3 1301 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 GIMAP6Q6P9H5 292 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 MPNDQ8N594 471 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 ALDH8A1Q9H2A2 487 aaPredicted RBP27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 UBAP1LF5GYI3 381 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 APPP05067 770 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 RASGRF1Q13972 1273 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 AMIGO3Q86WK7 504 aa27.34■■□□□ 1.97
CLPTM1-201ENST00000337392 KDM4AO75164 1064 aa27.33■■□□□ 1.97
CLPTM1-201ENST00000337392 NTSR2O95665 410 aa27.33■■□□□ 1.97
CLPTM1-201ENST00000337392 SLC51AQ86UW1 340 aa27.33■■□□□ 1.97
CLPTM1-201ENST00000337392 TMEM87AQ8NBN3 555 aa27.33■■□□□ 1.97
CLPTM1-201ENST00000337392 CDCA7Q9BWT1 371 aaPredicted RBP27.33■■□□□ 1.97
CLPTM1-201ENST00000337392 UBE2HP62256 183 aa27.32■■□□□ 1.96
CLPTM1-201ENST00000337392 NBPF3Q9H094 633 aa27.32■■□□□ 1.96
CLPTM1-201ENST00000337392 GJB4Q9NTQ9 266 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms