RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 UQCRHP07919 91 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
UBA1-201ENST00000335972 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 CCDC158Q5M9N0 1113 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 DNAJC25Q9H1X3 360 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 GREM2Q9H772 168 aa17.5■□□□□ 0.39
UBA1-201ENST00000335972 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 METTL24Q5JXM2 366 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
UBA1-201ENST00000335972 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
UBA1-201ENST00000335972 GLI3P10071 1580 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 RXRAP19793 462 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 ISCA1Q9BUE6 129 aa17.49■□□□□ 0.39
UBA1-201ENST00000335972 PFKFB2O60825 505 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 LDHAL6AQ6ZMR3 332 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 USP28Q96RU2 1077 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 ALDH8A1Q9H2A2 487 aaPredicted RBP17.48■□□□□ 0.39
UBA1-201ENST00000335972 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 FOXP2O15409 715 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
UBA1-201ENST00000335972 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 PYCARDQ9ULZ3 195 aa17.48■□□□□ 0.39
UBA1-201ENST00000335972 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
UBA1-201ENST00000335972 INCENPQ9NQS7 918 aa17.47■□□□□ 0.39
UBA1-201ENST00000335972 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
UBA1-201ENST00000335972 FGAP02671 866 aa17.47■□□□□ 0.39
UBA1-201ENST00000335972 POLR3DP05423 398 aaPredicted RBP17.47■□□□□ 0.39
UBA1-201ENST00000335972 DRC7Q8IY82 874 aa17.47■□□□□ 0.39
UBA1-201ENST00000335972 DSCC1Q9BVC3 393 aa17.47■□□□□ 0.39
UBA1-201ENST00000335972 APPP05067 770 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 ITGA6P23229 1130 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 SLC4A9Q96Q91 983 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
UBA1-201ENST00000335972 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
UBA1-201ENST00000335972 TPM2P07951 284 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 KCPQ6ZWJ8 1503 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 PALLDQ8WX93 1383 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 PTGS1P23219 599 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 CCDC144CPQ8IYA2 1237 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 KCNF1Q9H3M0 494 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 GOLPH3LQ9H4A5 285 aa17.46■□□□□ 0.39
UBA1-201ENST00000335972 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBA1-201ENST00000335972 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
UBA1-201ENST00000335972 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
UBA1-201ENST00000335972 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 ELP1O95163 1332 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 MCAMP43121 646 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
UBA1-201ENST00000335972 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
UBA1-201ENST00000335972 KLF18A0A0U1RQI7 1052 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 ADD1P35611 737 aaKnown RBP17.44■□□□□ 0.38
UBA1-201ENST00000335972 ME1P48163 572 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 LRMPQ12912 555 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 PRC1O43663 620 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
UBA1-201ENST00000335972 GPAA1O43292 621 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
UBA1-201ENST00000335972 MCM5P33992 734 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 DCCP43146 1447 aa17.44■□□□□ 0.38
UBA1-201ENST00000335972 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
UBA1-201ENST00000335972 CIAO1O76071 339 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
UBA1-201ENST00000335972 SLC9C2Q5TAH2 1124 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
UBA1-201ENST00000335972 ZNF165P49910 485 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
UBA1-201ENST00000335972 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
UBA1-201ENST00000335972 STARD3NLO95772 234 aa17.42■□□□□ 0.38
UBA1-201ENST00000335972 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
UBA1-201ENST00000335972 SENP2Q9HC62 589 aa17.42■□□□□ 0.38
UBA1-201ENST00000335972 PCCAP05165 728 aaPredicted RBP17.42■□□□□ 0.38
UBA1-201ENST00000335972 PHKA1P46020 1223 aa17.42■□□□□ 0.38
UBA1-201ENST00000335972 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
UBA1-201ENST00000335972 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
UBA1-201ENST00000335972 CCDC186Q7Z3E2 898 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 DDX19AQ9NUU7 478 aaKnown RBP17.41■□□□□ 0.38
UBA1-201ENST00000335972 TJP1Q07157 1748 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms