RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 HAUS7Q99871 368 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 RESTQ13127 1097 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 CEP57L1Q8IYX8 460 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 MYL10Q9BUA6 226 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 ZNF609O15014 1411 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 PRC1O43663 620 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 STX1AQ16623 288 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 GOLPH3LQ9H4A5 285 aa13.78□□□□□ -0.2
EFCAB13-201ENST00000331493 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.2
EFCAB13-201ENST00000331493 AIFM3Q96NN9 605 aa13.77□□□□□ -0.2
EFCAB13-201ENST00000331493 M0R2C6 588 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 EYA2O00167 538 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 ZNF213O14771 459 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 ZAP70P43403 619 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 TMC6Q7Z403 805 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 COL15A1P39059 1388 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 PTPN14Q15678 1187 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 NBPF14Q5TI25 921 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 ANO10Q9NW15 660 aa13.77□□□□□ -0.21
EFCAB13-201ENST00000331493 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 MAST3O60307 1309 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 PHKBQ93100 1093 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 IFIT5Q13325 482 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 PDILTQ8N807 584 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 CCDC94Q9BW85 323 aaPredicted RBP13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
EFCAB13-201ENST00000331493 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 NAT10Q9H0A0 1025 aaKnown RBP13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 MED23Q9ULK4 1368 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 USP27XA6NNY8 438 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 SNAP23O00161 211 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 ELP1O95163 1332 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 PFKFB2O60825 505 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 HSPA2P54652 639 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 SCARF1Q14162 830 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 DENND2AQ9ULE3 1009 aa13.75□□□□□ -0.21
EFCAB13-201ENST00000331493 CTDNEP1O95476 244 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 FGAP02671 866 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 NDUFA8P51970 172 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 SERPINC1P01008 464 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 ZKSCAN3Q9BRR0 538 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 NRDCO43847 1150 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 TPM4P67936 248 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 FAM160A1Q05DH4 1040 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
EFCAB13-201ENST00000331493 TRIM29Q14134 588 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 KCNB2Q92953 911 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 PUS7LQ9H0K6 701 aaKnown RBP13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 SPTLC2O15270 562 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 B4E1Z4 1266 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
EFCAB13-201ENST00000331493 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms