RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
TRAIP-201ENST00000331456 SCN7AQ01118 1682 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-201ENST00000331456 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-201ENST00000331456 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 MCAMP43121 646 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 CCDC102BQ68D86 513 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 HELBQ8NG08 1087 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-201ENST00000331456 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
TRAIP-201ENST00000331456 BRD1O95696 1058 aa16.66■□□□□ 0.26
TRAIP-201ENST00000331456 APPBP2Q92624 585 aa16.66■□□□□ 0.26
TRAIP-201ENST00000331456 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
TRAIP-201ENST00000331456 ARAP2Q8WZ64 1704 aa16.66■□□□□ 0.26
TRAIP-201ENST00000331456 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
TRAIP-201ENST00000331456 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
TRAIP-201ENST00000331456 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
TRAIP-201ENST00000331456 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
TRAIP-201ENST00000331456 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
TRAIP-201ENST00000331456 M0R2C6 588 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 CYP21A2P08686 494 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 PHKA1P46020 1223 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
TRAIP-201ENST00000331456 LY75O60449 1722 aa16.64■□□□□ 0.25
TRAIP-201ENST00000331456 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
TRAIP-201ENST00000331456 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
TRAIP-201ENST00000331456 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
TRAIP-201ENST00000331456 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-201ENST00000331456 QTRT2Q9H974 415 aaKnown RBP16.64■□□□□ 0.25
TRAIP-201ENST00000331456 SBF2Q86WG5 1849 aa16.64■□□□□ 0.25
TRAIP-201ENST00000331456 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
TRAIP-201ENST00000331456 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
TRAIP-201ENST00000331456 LARGE1O95461 756 aa16.63■□□□□ 0.25
TRAIP-201ENST00000331456 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
TRAIP-201ENST00000331456 SRP68Q9UHB9 627 aaKnown RBP16.63■□□□□ 0.25
TRAIP-201ENST00000331456 CHRNDQ07001 517 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 ME3Q16798 604 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 AKAP11Q9UKA4 1901 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 ADD2P35612 726 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 UBE3CQ15386 1083 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
TRAIP-201ENST00000331456 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
TRAIP-201ENST00000331456 MYH7P12883 1935 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 IDH1O75874 414 aaKnown RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 RFC4P35249 363 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 TRAPPC3LQ5T215 181 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 SLC9C2Q5TAH2 1124 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 FOXD4L5Q5VV16 416 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 FOXD4L4Q8WXT5 416 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 NLRP3Q96P20 1036 aa16.61■□□□□ 0.25
TRAIP-201ENST00000331456 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 PIH1D3Q9NQM4 214 aaKnown RBP16.61■□□□□ 0.25
TRAIP-201ENST00000331456 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 BSDC1Q9NW68 430 aaPredicted RBP16.6■□□□□ 0.25
TRAIP-201ENST00000331456 C4BP0C0L5 1744 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 FGD1P98174 961 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
TRAIP-201ENST00000331456 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
TRAIP-201ENST00000331456 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
TRAIP-201ENST00000331456 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
TRAIP-201ENST00000331456 COL24A1Q17RW2 1714 aa16.6■□□□□ 0.25
TRAIP-201ENST00000331456 GPAA1O43292 621 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 STX6O43752 255 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 GJB2P29033 226 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 MAP3K12Q12852 859 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 KLHL40Q2TBA0 621 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 Q6ZUG5 572 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
TRAIP-201ENST00000331456 E7EWF7 191 aa16.58■□□□□ 0.25
TRAIP-201ENST00000331456 ADRA2BP18089 450 aa16.58■□□□□ 0.25
TRAIP-201ENST00000331456 STOX1Q6ZVD7 989 aa16.58■□□□□ 0.25
TRAIP-201ENST00000331456 NECAB1Q8N987 351 aa16.58■□□□□ 0.25
TRAIP-201ENST00000331456 LMBRD1Q9NUN5 540 aa16.58■□□□□ 0.25
TRAIP-201ENST00000331456 SOCS7O14512 581 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 NPHP1O15259 732 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
TRAIP-201ENST00000331456 PDE6AP16499 860 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 SYT1P21579 422 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
TRAIP-201ENST00000331456 L1TD1Q5T7N2 865 aaKnown RBP16.58■□□□□ 0.24
TRAIP-201ENST00000331456 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
TRAIP-201ENST00000331456 SNAP23O00161 211 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms