RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 JAKMIP3Q5VZ66 844 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 MPHOSPH8Q99549 860 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 ATL3Q6DD88 541 aa28.21■■■□□ 2.11
SOX1-201ENST00000330949 MYH15Q9Y2K3 1946 aa28.21■■■□□ 2.11
SOX1-201ENST00000330949 COL9A3Q14050 684 aaPredicted RBP28.21■■■□□ 2.11
SOX1-201ENST00000330949 HMG20BQ9P0W2 317 aa28.21■■■□□ 2.11
SOX1-201ENST00000330949 KIF13AQ9H1H9 1805 aa28.21■■■□□ 2.11
SOX1-201ENST00000330949 ADD1P35611 737 aaKnown RBP28.2■■■□□ 2.11
SOX1-201ENST00000330949 SNRKQ9NRH2 765 aa28.2■■■□□ 2.1
SOX1-201ENST00000330949 MAGEA9P43362 315 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
SOX1-201ENST00000330949 ZSCAN12O43309 604 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 GNL2Q13823 731 aaKnown RBP28.19■■■□□ 2.1
SOX1-201ENST00000330949 TTC31Q49AM3 519 aaPredicted RBP28.19■■■□□ 2.1
SOX1-201ENST00000330949 FSIP1Q8NA03 581 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 RABGGTAQ92696 567 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 RGPD1P0DJD0 1748 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 FCHSD1Q86WN1 690 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 FBXW7Q969H0 707 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 SDF4Q9BRK5 362 aa28.19■■■□□ 2.1
SOX1-201ENST00000330949 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
SOX1-201ENST00000330949 IFIT2P09913 472 aaKnown RBP28.18■■■□□ 2.1
SOX1-201ENST00000330949 GUCY2CP25092 1073 aa28.18■■■□□ 2.1
SOX1-201ENST00000330949 ZNF396Q96N95 335 aaPredicted RBP28.18■■■□□ 2.1
SOX1-201ENST00000330949 HDGFL1Q5TGJ6 251 aa28.18■■■□□ 2.1
SOX1-201ENST00000330949 JRKLQ9Y4A0 524 aa28.18■■■□□ 2.1
SOX1-201ENST00000330949 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
SOX1-201ENST00000330949 NMIQ13287 307 aaPredicted RBP28.17■■■□□ 2.1
SOX1-201ENST00000330949 TSGA10IPQ3SY00 556 aa28.17■■■□□ 2.1
SOX1-201ENST00000330949 FAM227BQ96M60 508 aa28.17■■■□□ 2.1
SOX1-201ENST00000330949 SBNO1A3KN83 1393 aa28.17■■■□□ 2.1
SOX1-201ENST00000330949 NAA16Q6N069 864 aaPredicted RBP28.17■■■□□ 2.1
SOX1-201ENST00000330949 RSRC2Q7L4I2 434 aaKnown RBP28.17■■■□□ 2.1
SOX1-201ENST00000330949 PARD6BQ9BYG5 372 aa28.17■■■□□ 2.1
SOX1-201ENST00000330949 EPC1Q9H2F5 836 aa28.17■■■□□ 2.1
SOX1-201ENST00000330949 FANCGO15287 622 aa28.16■■■□□ 2.1
SOX1-201ENST00000330949 CCDC151A5D8V7 595 aa28.16■■■□□ 2.1
SOX1-201ENST00000330949 KCNA6P17658 529 aa28.16■■■□□ 2.1
SOX1-201ENST00000330949 HOXC9P31274 260 aa28.16■■■□□ 2.1
SOX1-201ENST00000330949 IGSF1Q8N6C5 1336 aa28.16■■■□□ 2.1
SOX1-201ENST00000330949 ME1P48163 572 aa28.15■■■□□ 2.1
SOX1-201ENST00000330949 MAP3K9P80192 1104 aa28.15■■■□□ 2.1
SOX1-201ENST00000330949 PPP2R3AQ06190 1150 aa28.15■■■□□ 2.1
SOX1-201ENST00000330949 DPCR1Q3MIW9 517 aa28.15■■■□□ 2.1
SOX1-201ENST00000330949 MYCBPQ99417 103 aaPredicted RBP28.15■■■□□ 2.1
SOX1-201ENST00000330949 NCAPGQ9BPX3 1015 aa28.15■■■□□ 2.1
SOX1-201ENST00000330949 RPS6KA5O75582 802 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 KRT32Q14532 448 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 LONRF2Q1L5Z9 754 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 ERCC4Q92889 916 aaPredicted RBP28.14■■■□□ 2.1
SOX1-201ENST00000330949 KIAA1468Q9P260 1216 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 MRPS27Q92552 414 aaKnown RBP28.14■■■□□ 2.1
SOX1-201ENST00000330949 USP28Q96RU2 1077 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 TOPAZ1Q8N9V7 1692 aa28.14■■■□□ 2.1
SOX1-201ENST00000330949 GOLGA6L9A6NEM1 432 aa28.14■■■□□ 2.09
SOX1-201ENST00000330949 H3BQF6 201 aa28.14■■■□□ 2.09
SOX1-201ENST00000330949 MAP2K7O14733 419 aa28.14■■■□□ 2.09
SOX1-201ENST00000330949 BRD3Q15059 726 aa28.14■■■□□ 2.09
SOX1-201ENST00000330949 FMR1NBQ8N0W7 255 aaPredicted RBP28.14■■■□□ 2.09
SOX1-201ENST00000330949 GOLGA1Q92805 767 aa28.13■■■□□ 2.09
SOX1-201ENST00000330949 FTOQ9C0B1 505 aaKnown RBP eCLIP28.13■■■□□ 2.09
SOX1-201ENST00000330949 MRFAP1Q9Y605 127 aa28.13■■■□□ 2.09
SOX1-201ENST00000330949 UTP14AQ9BVJ6 771 aaKnown RBP28.13■■■□□ 2.09
SOX1-201ENST00000330949 NBPF7P0C2Y1 421 aaPredicted RBP28.12■■■□□ 2.09
SOX1-201ENST00000330949 LLPHQ9BRT6 129 aaKnown RBP28.12■■■□□ 2.09
SOX1-201ENST00000330949 ERC1Q8IUD2 1116 aa28.12■■■□□ 2.09
SOX1-201ENST00000330949 LGR6Q9HBX8 967 aa28.12■■■□□ 2.09
SOX1-201ENST00000330949 KCNQ3O43525 872 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 HSP90B1P14625 803 aaKnown RBP28.11■■■□□ 2.09
SOX1-201ENST00000330949 TAF7Q15545 349 aaPredicted RBP28.11■■■□□ 2.09
SOX1-201ENST00000330949 TXLNAP40222 546 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 FANCCQ00597 558 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 SMARCC2Q8TAQ2 1214 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 PPM1EQ8WY54 764 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 TAF6LQ9Y6J9 622 aa28.11■■■□□ 2.09
SOX1-201ENST00000330949 MMP14P50281 582 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 PACS2Q86VP3 889 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 MKRN1Q9UHC7 482 aaKnown RBP28.1■■■□□ 2.09
SOX1-201ENST00000330949 KDRP35968 1356 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 VWA3AA6NCI4 1184 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 VPS18Q9P253 973 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 FMNL2Q96PY5 1086 aa28.1■■■□□ 2.09
SOX1-201ENST00000330949 NALCNQ8IZF0 1738 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 CBFA2T2O43439 604 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 ARHGAP6O43182 974 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 APOBRQ0VD83 1088 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 MSL3Q8N5Y2 521 aaKnown RBP28.09■■■□□ 2.09
SOX1-201ENST00000330949 DEF6Q9H4E7 631 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 MED23Q9ULK4 1368 aa28.09■■■□□ 2.09
SOX1-201ENST00000330949 A0A0D9SFI3 127 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 EIF3CLB5ME19 914 aaKnown RBP28.08■■■□□ 2.09
SOX1-201ENST00000330949 GNG11P61952 73 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 NCAPHQ15003 741 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 EIF3CQ99613 913 aaKnown RBP28.08■■■□□ 2.09
SOX1-201ENST00000330949 PPP2R2CQ9Y2T4 447 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 LOC102724159A0A0B4J2E5 919 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 A0A1W2PQ27 194 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 A0A1W2PQ64 194 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 A0A1W2PQD8 194 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms