RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 PDRG1Q9NUG6 133 aa8.7□□□□□ -1.02
TRIM49-201ENST00000329758 TTC41PQ6P2S7 1318 aa8.7□□□□□ -1.02
TRIM49-201ENST00000329758 DCCP43146 1447 aa8.7□□□□□ -1.02
TRIM49-201ENST00000329758 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
TRIM49-201ENST00000329758 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
TRIM49-201ENST00000329758 SKILP12757 684 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 NEK4P51957 841 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC144BQ3MJ40 725 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 ARHGEF25Q86VW2 580 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC144CPQ8IYA2 1237 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 OTUD6BQ8N6M0 293 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 ARFGAP3Q9NP61 516 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 GNL3LQ9NVN8 582 aaKnown RBP8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CHPF2Q9P2E5 772 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CAMTA1Q9Y6Y1 1673 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 ANKRD33BA6NCL7 494 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 TMCO5BA8MYB1 307 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CCP110O43303 1012 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 MNAT1P51948 309 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 GSDMDP57764 484 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 PROSER3Q2NL68 480 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC30Q5VVM6 783 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 GPR161Q8N6U8 529 aaKnown RBP8.69□□□□□ -1.02
TRIM49-201ENST00000329758 MIEF2Q96C03 454 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 NUP62CLQ9H1M0 184 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
TRIM49-201ENST00000329758 FAM208AQ9UK61 1670 aaKnown RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 NPHP1O15259 732 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 PPFIA4O75335 1185 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 SEC31AO94979 1220 aaKnown RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 PIP4K2AP48426 406 aaPredicted RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 EIF4A1P60842 406 aaKnown RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 FAXDC2Q96IV6 333 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 ZCCHC17Q9NP64 241 aaKnown RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC69A6NI79 296 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 CTAGE5O15320 804 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 ERLIN2O94905 339 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 F13A1P00488 732 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 ATF3P18847 181 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 NEDD9Q14511 834 aa8.68□□□□□ -1.02
TRIM49-201ENST00000329758 ZNF335Q9H4Z2 1342 aaPredicted RBP8.68□□□□□ -1.02
TRIM49-201ENST00000329758 LMO7Q8WWI1 1683 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 COL18A1P39060 1754 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 EIF3JO75822 258 aaKnown RBP8.67□□□□□ -1.02
TRIM49-201ENST00000329758 ELF1P32519 619 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 TEFQ10587 303 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 ANO6Q4KMQ2 910 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 KCNH5Q8NCM2 988 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 FUT8Q9BYC5 575 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 IL1RAPL2Q9NP60 686 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
TRIM49-201ENST00000329758 H3BQF6 201 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 MPHOSPH10O00566 681 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 MAP2K7O14733 419 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 SRGAP3O43295 1099 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 FIBPO43427 364 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 SDSP20132 328 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC34Q96HJ3 373 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 USP44Q9H0E7 712 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 DDX19AQ9NUU7 478 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 PI4KAP2A4QPH2 592 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC151A5D8V7 595 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 RNMTO43148 476 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 EPB41L2O43491 1005 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 NRDCO43847 1150 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 MAP4K4O95819 1239 aaPredicted RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 GNAI2P04899 355 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 NBPF7P0C2Y1 421 aaPredicted RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 SCP2P22307 547 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 HNRNPH1P31943 449 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 CCT4P50991 539 aaKnown RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 DDR1Q08345 913 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 BRD3Q15059 726 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
TRIM49-201ENST00000329758 PI4KAP1Q8N8J0 262 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 PPP1R13BQ96KQ4 1090 aa8.66□□□□□ -1.02
TRIM49-201ENST00000329758 CEMIPQ8WUJ3 1361 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 KDM3BQ7LBC6 1761 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 STX6O43752 255 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 EVCP57679 992 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.02
TRIM49-201ENST00000329758 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
TRIM49-201ENST00000329758 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms