RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZMYM1Q5SVZ6 1142 aa24.33■■□□□ 1.48
RIPPLY3-201ENST00000329553 CREB3L3Q68CJ9 461 aa24.33■■□□□ 1.48
RIPPLY3-201ENST00000329553 HELLSQ9NRZ9 838 aa24.33■■□□□ 1.48
RIPPLY3-201ENST00000329553 SSFA2P28290 1259 aa24.32■■□□□ 1.48
RIPPLY3-201ENST00000329553 CELF1Q92879 486 aaKnown RBP24.32■■□□□ 1.48
RIPPLY3-201ENST00000329553 BSDC1Q9NW68 430 aaPredicted RBP24.31■■□□□ 1.48
RIPPLY3-201ENST00000329553 GYS1P13807 737 aa24.31■■□□□ 1.48
RIPPLY3-201ENST00000329553 ARID4AP29374 1257 aaPredicted RBP24.31■■□□□ 1.48
RIPPLY3-201ENST00000329553 SLC27A2O14975 620 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 MCM2P49736 904 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 ADCK5Q3MIX3 580 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 CARMIL3Q8ND23 1372 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 FSD2A1L4K1 749 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 DDX11L8A8MPP1 907 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 TRAK2O60296 914 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 UQCRFS1P1P0C7P4 283 aa24.3■■□□□ 1.48
RIPPLY3-201ENST00000329553 PLSCR1O15162 318 aa24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 NPHP1O15259 732 aa24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 APBA3O96018 575 aa24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 ARAP2Q8WZ64 1704 aa24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 CYP2E1P05181 493 aaPredicted RBP24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 ZKSCAN1P17029 563 aaPredicted RBP24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 TMX3Q96JJ7 454 aa24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 RGS17Q9UGC6 210 aaPredicted RBP24.29■■□□□ 1.48
RIPPLY3-201ENST00000329553 MINPP1Q9UNW1 487 aa24.28■■□□□ 1.48
RIPPLY3-201ENST00000329553 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 TM4SF1P30408 202 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 RPS8P62241 208 aaKnown RBP24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 LRRFIP1Q32MZ4 808 aaKnown RBP24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 OSBP2Q969R2 916 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 JAKMIP1Q96N16 626 aaKnown RBP24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 TTC14Q96N46 770 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 CPA1P15085 419 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 NOL8Q76FK4 1167 aaKnown RBP24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 TM6SF1Q9BZW5 370 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 MAST3O60307 1309 aa24.27■■□□□ 1.48
RIPPLY3-201ENST00000329553 ZFYP08048 801 aaPredicted RBP24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 RAB3GAP1Q15042 981 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 RNF20Q5VTR2 975 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 HMG20BQ9P0W2 317 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 TAF6LQ9Y6J9 622 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 WTIPA6NIX2 430 aaPredicted RBP24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 BCAMP50895 628 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 CNBD1Q8NA66 436 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 ZSWIM6Q9HCJ5 1215 aa24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 PIH1D3Q9NQM4 214 aaKnown RBP24.26■■□□□ 1.47
RIPPLY3-201ENST00000329553 M0R2C6 588 aa24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 TTF1Q15361 905 aaPredicted RBP24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 VPS53Q5VIR6 699 aa24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 TNPO1Q92973 898 aaKnown RBP24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 GOLGA6L3A6NEY3 463 aa24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 HMGB2P26583 209 aaKnown RBP24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 U3KPZ7 1027 aaPredicted RBP24.25■■□□□ 1.47
RIPPLY3-201ENST00000329553 RASGRF1Q13972 1273 aa24.24■■□□□ 1.47
RIPPLY3-201ENST00000329553 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
RIPPLY3-201ENST00000329553 SPATA5Q8NB90 893 aa24.24■■□□□ 1.47
RIPPLY3-201ENST00000329553 WASHC4Q2M389 1173 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 TSGA10IPQ3SY00 556 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 POTEAQ6S8J7 498 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 ZGPATQ8N5A5 531 aaKnown RBP24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 TNRC6CQ9HCJ0 1690 aaKnown RBP24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 UBE4AQ14139 1066 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 ZNF827Q17R98 1081 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 DSCC1Q9BVC3 393 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 CYP46A1Q9Y6A2 500 aa24.23■■□□□ 1.47
RIPPLY3-201ENST00000329553 SERPINB2P05120 415 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 HSPD1P10809 573 aaKnown RBP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 AK2P54819 239 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 RUFY3Q7L099 469 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 APPBP2Q92624 585 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 MYO5AQ9Y4I1 1855 aaKnown RBP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 A0A1B0GUL6 1792 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 CUL4AQ13619 759 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 COL9A3Q14050 684 aaPredicted RBP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 PUS7LQ9H0K6 701 aaKnown RBP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 GZF1Q9H116 711 aaPredicted RBP24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 TFCP2L1Q9NZI6 479 aa24.22■■□□□ 1.47
RIPPLY3-201ENST00000329553 MYH7P12883 1935 aa24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 RPAP1Q9BWH6 1393 aaPredicted RBP24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 XRCC6P12956 609 aaKnown RBP eCLIP24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 ADD2P35612 726 aa24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 SLC9C2Q5TAH2 1124 aa24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
RIPPLY3-201ENST00000329553 IDH1O75874 414 aaKnown RBP24.2■■□□□ 1.47
RIPPLY3-201ENST00000329553 CYP21A2P08686 494 aa24.2■■□□□ 1.47
RIPPLY3-201ENST00000329553 PSMA5P28066 241 aa24.2■■□□□ 1.47
RIPPLY3-201ENST00000329553 PDRG1Q9NUG6 133 aa24.2■■□□□ 1.47
RIPPLY3-201ENST00000329553 ZSCAN25Q6NSZ9 544 aa24.2■■□□□ 1.46
RIPPLY3-201ENST00000329553 GYG1P46976 350 aa24.19■■□□□ 1.46
RIPPLY3-201ENST00000329553 GBP4Q96PP9 640 aa24.19■■□□□ 1.46
RIPPLY3-201ENST00000329553 LARP6Q9BRS8 491 aaKnown RBP24.19■■□□□ 1.46
RIPPLY3-201ENST00000329553 CWC22Q9HCG8 908 aaKnown RBP24.19■■□□□ 1.46
RIPPLY3-201ENST00000329553 DDR1Q08345 913 aa24.19■■□□□ 1.46
RIPPLY3-201ENST00000329553 COL23A1Q86Y22 540 aaPredicted RBP24.18■■□□□ 1.46
RIPPLY3-201ENST00000329553 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
RIPPLY3-201ENST00000329553 LIMCH1Q9UPQ0 1083 aa24.18■■□□□ 1.46
RIPPLY3-201ENST00000329553 ZNF804BA4D1E1 1349 aa24.17■■□□□ 1.46
RIPPLY3-201ENST00000329553 UBE3CQ15386 1083 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms