RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 BCL2L12Q9HB09 334 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 FOXP2O15409 715 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 RPS6KA4O75676 772 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 SKOR2Q2VWA4 1001 aaPredicted RBP18.94■□□□□ 0.62
PGBD2-201ENST00000329291 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 AMIGO3Q86WK7 504 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 DSCC1Q9BVC3 393 aa18.94■□□□□ 0.62
PGBD2-201ENST00000329291 PRPF40AO75400 957 aaKnown RBP18.93■□□□□ 0.62
PGBD2-201ENST00000329291 ERFEQ4G0M1 354 aa18.93■□□□□ 0.62
PGBD2-201ENST00000329291 NEK1Q96PY6 1258 aa18.93■□□□□ 0.62
PGBD2-201ENST00000329291 ALDH8A1Q9H2A2 487 aaPredicted RBP18.93■□□□□ 0.62
PGBD2-201ENST00000329291 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
PGBD2-201ENST00000329291 GNPATO15228 680 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 TTLL5Q6EMB2 1281 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 BICDL1Q6ZP65 573 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 BCL11BQ9C0K0 894 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 SH2B1Q9NRF2 756 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 MROH5Q6ZUA9 1318 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 PTMSP20962 102 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 PUM3Q15397 648 aaKnown RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 WASHC4Q2M389 1173 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 CCDC152Q4G0S7 254 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 ZNF512BQ96KM6 892 aaPredicted RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 SRP68Q9UHB9 627 aaKnown RBP18.92■□□□□ 0.62
PGBD2-201ENST00000329291 SMC3Q9UQE7 1217 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 COL4A1P02462 1669 aa18.92■□□□□ 0.62
PGBD2-201ENST00000329291 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
PGBD2-201ENST00000329291 FSD2A1L4K1 749 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 SYT1P21579 422 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 KRT32Q14532 448 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 LPIN2Q92539 896 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 RTCBQ9Y3I0 505 aaKnown RBP18.91■□□□□ 0.62
PGBD2-201ENST00000329291 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
PGBD2-201ENST00000329291 LY75O60449 1722 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 SPEF2Q9C093 1822 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 LRP5O75197 1615 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 GJB2P29033 226 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 NARFQ9UHQ1 456 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
PGBD2-201ENST00000329291 ARID4AP29374 1257 aaPredicted RBP18.9■□□□□ 0.62
PGBD2-201ENST00000329291 LRRC2Q9BYS8 371 aa18.9■□□□□ 0.62
PGBD2-201ENST00000329291 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
PGBD2-201ENST00000329291 SCN7AQ01118 1682 aa18.89■□□□□ 0.62
PGBD2-201ENST00000329291 WTIPA6NIX2 430 aaPredicted RBP18.89■□□□□ 0.62
PGBD2-201ENST00000329291 ZPR1O75312 459 aa18.89■□□□□ 0.62
PGBD2-201ENST00000329291 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.62
PGBD2-201ENST00000329291 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
PGBD2-201ENST00000329291 ZFYP08048 801 aaPredicted RBP18.89■□□□□ 0.61
PGBD2-201ENST00000329291 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
PGBD2-201ENST00000329291 GPT2Q8TD30 523 aa18.89■□□□□ 0.61
PGBD2-201ENST00000329291 RTL9Q8NET4 1388 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 STX6O43752 255 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 STK3Q13188 491 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 Q6ZUG5 572 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 KRT27Q7Z3Y8 459 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 APPBP2Q92624 585 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 LAMB2P55268 1798 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
PGBD2-201ENST00000329291 ANKRD1Q15327 319 aa18.88■□□□□ 0.61
PGBD2-201ENST00000329291 NSFL1CQ9UNZ2 370 aaKnown RBP18.88■□□□□ 0.61
PGBD2-201ENST00000329291 EP400Q96L91 3159 aa18.87■□□□□ 0.61
PGBD2-201ENST00000329291 E7EWF7 191 aa18.87■□□□□ 0.61
PGBD2-201ENST00000329291 ADD2P35612 726 aa18.87■□□□□ 0.61
PGBD2-201ENST00000329291 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
PGBD2-201ENST00000329291 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
PGBD2-201ENST00000329291 BRPF3Q9ULD4 1205 aa18.87■□□□□ 0.61
PGBD2-201ENST00000329291 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 SLC5A1P13866 664 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 BCAMP50895 628 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 CHRNDQ07001 517 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 FGAP02671 866 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
PGBD2-201ENST00000329291 EXOSC10Q01780 885 aaKnown RBP18.86■□□□□ 0.61
PGBD2-201ENST00000329291 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
PGBD2-201ENST00000329291 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 NYXQ9GZU5 481 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 GDPD2Q9HCC8 539 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
PGBD2-201ENST00000329291 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 GPAA1O43292 621 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 IDH1O75874 414 aaKnown RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 UQCRFS1P1P0C7P4 283 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 SF3B3Q15393 1217 aaKnown RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 SPATA5Q8NB90 893 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 ARHGEF1Q92888 912 aaKnown RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 MTMR6Q9Y217 621 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 HAND2P61296 217 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms