RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 SAMD7Q7Z3H4 446 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
CCDC65-202ENST00000320516 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
CCDC65-202ENST00000320516 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 FMR1Q06787 632 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC65-202ENST00000320516 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 AGBL3Q8NEM8 1001 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
CCDC65-202ENST00000320516 TRAF5O00463 557 aa12.5□□□□□ -0.41
CCDC65-202ENST00000320516 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
CCDC65-202ENST00000320516 TAF7LQ5H9L4 462 aa12.5□□□□□ -0.41
CCDC65-202ENST00000320516 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
CCDC65-202ENST00000320516 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
CCDC65-202ENST00000320516 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
CCDC65-202ENST00000320516 KCNJ4P48050 445 aa12.49□□□□□ -0.41
CCDC65-202ENST00000320516 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
CCDC65-202ENST00000320516 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
CCDC65-202ENST00000320516 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
CCDC65-202ENST00000320516 KIF16BQ96L93 1317 aa12.49□□□□□ -0.41
CCDC65-202ENST00000320516 CST9Q5W186 159 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
CCDC65-202ENST00000320516 CD209Q9NNX6 404 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 BCAR3O75815 825 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
CCDC65-202ENST00000320516 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
CCDC65-202ENST00000320516 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
CCDC65-202ENST00000320516 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
CCDC65-202ENST00000320516 IL1R1P14778 569 aa12.47□□□□□ -0.41
CCDC65-202ENST00000320516 RFX5P48382 616 aaPredicted RBP12.47□□□□□ -0.41
CCDC65-202ENST00000320516 RBM26Q5T8P6 1007 aaKnown RBP12.47□□□□□ -0.41
CCDC65-202ENST00000320516 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
CCDC65-202ENST00000320516 CDC37L1Q7L3B6 337 aa12.47□□□□□ -0.41
CCDC65-202ENST00000320516 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
CCDC65-202ENST00000320516 PLIN1O60240 522 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 TRIM27P14373 513 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 LRRC24Q50LG9 513 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 VGLL2Q8N8G2 317 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
CCDC65-202ENST00000320516 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.42
CCDC65-202ENST00000320516 GTF2IP78347 998 aa12.46□□□□□ -0.42
CCDC65-202ENST00000320516 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.42
CCDC65-202ENST00000320516 MEIS3Q99687 375 aa12.46□□□□□ -0.42
CCDC65-202ENST00000320516 MYOZ2Q9NPC6 264 aa12.46□□□□□ -0.42
CCDC65-202ENST00000320516 TNNQ9UQP3 1299 aa12.46□□□□□ -0.42
CCDC65-202ENST00000320516 ASTN2O75129 1339 aaPredicted RBP12.45□□□□□ -0.42
CCDC65-202ENST00000320516 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
CCDC65-202ENST00000320516 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
CCDC65-202ENST00000320516 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
CCDC65-202ENST00000320516 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
CCDC65-202ENST00000320516 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
CCDC65-202ENST00000320516 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
CCDC65-202ENST00000320516 VEGFBP49765 207 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 SCARF1Q14162 830 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 DEFB115Q30KQ5 88 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 KRT26Q7Z3Y9 468 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 CERS5Q8N5B7 392 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 FAM84BQ96KN1 310 aaPredicted RBP12.44□□□□□ -0.42
CCDC65-202ENST00000320516 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
CCDC65-202ENST00000320516 TLL2Q9Y6L7 1015 aa12.44□□□□□ -0.42
CCDC65-202ENST00000320516 POLR2AP24928 1970 aaKnown RBP12.44□□□□□ -0.42
CCDC65-202ENST00000320516 PDE8BO95263 885 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 MMP14P50281 582 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 DCPSQ96C86 337 aaKnown RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 ABT1Q9ULW3 272 aaKnown RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 ADM5C9JUS6 153 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 EYA2O00167 538 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 SASH1O94885 1247 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 GYG1P46976 350 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 METTL24Q5JXM2 366 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 ANGEL2Q5VTE6 544 aaKnown RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 SAPCD2Q86UD0 394 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
CCDC65-202ENST00000320516 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
CCDC65-202ENST00000320516 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 WNT10BO00744 389 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
CCDC65-202ENST00000320516 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 FBXO33Q7Z6M2 555 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 ZBED3Q96IU2 234 aaPredicted RBP12.42□□□□□ -0.42
CCDC65-202ENST00000320516 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
CCDC65-202ENST00000320516 GNAI3P08754 354 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms