RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CMTR1Q8N1G2 835 aaKnown RBP18.99■□□□□ 0.63
CLIP4-201ENST00000320081 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
CLIP4-201ENST00000320081 PDIA4P13667 645 aaKnown RBP18.99■□□□□ 0.63
CLIP4-201ENST00000320081 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
CLIP4-201ENST00000320081 MAPK8IP1Q9UQF2 711 aa18.99■□□□□ 0.63
CLIP4-201ENST00000320081 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
CLIP4-201ENST00000320081 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 NSFL1CQ9UNZ2 370 aaKnown RBP18.98■□□□□ 0.63
CLIP4-201ENST00000320081 CEP131Q9UPN4 1083 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 N4BP3O15049 544 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 ZNF76P36508 570 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 CRACR2BQ8N4Y2 399 aaPredicted RBP18.98■□□□□ 0.63
CLIP4-201ENST00000320081 STAMQ92783 540 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 PRM3Q9NNZ6 103 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 MBD4O95243 580 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 DRC1Q96MC2 740 aa18.98■□□□□ 0.63
CLIP4-201ENST00000320081 RNF41Q9H4P4 317 aaPredicted RBP18.98■□□□□ 0.63
CLIP4-201ENST00000320081 ACBD3Q9H3P7 528 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 BRD1O95696 1058 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 UVSSAQ2YD98 709 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 H0YHG0 523 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 EYA2O00167 538 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 SLFNL1Q499Z3 407 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
CLIP4-201ENST00000320081 KARSQ15046 597 aaKnown RBP18.97■□□□□ 0.63
CLIP4-201ENST00000320081 TDRD12Q587J7 1177 aaKnown RBP18.97■□□□□ 0.63
CLIP4-201ENST00000320081 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 CCDC12Q8WUD4 166 aaPredicted RBP18.97■□□□□ 0.63
CLIP4-201ENST00000320081 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
CLIP4-201ENST00000320081 TPCN1Q9ULQ1 816 aa18.97■□□□□ 0.63
CLIP4-201ENST00000320081 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
CLIP4-201ENST00000320081 ITGA6P23229 1130 aa18.96■□□□□ 0.63
CLIP4-201ENST00000320081 ZAP70P43403 619 aa18.96■□□□□ 0.63
CLIP4-201ENST00000320081 TTF1Q15361 905 aaPredicted RBP18.96■□□□□ 0.63
CLIP4-201ENST00000320081 XAGE2Q96GT9 111 aa18.96■□□□□ 0.63
CLIP4-201ENST00000320081 TSPYL1Q9H0U9 437 aa18.96■□□□□ 0.63
CLIP4-201ENST00000320081 FAM170AA1A519 330 aa18.95■□□□□ 0.62
CLIP4-201ENST00000320081 ODF2Q5BJF6 829 aa18.95■□□□□ 0.62
CLIP4-201ENST00000320081 IFIT1BQ5T764 474 aaKnown RBP18.95■□□□□ 0.62
CLIP4-201ENST00000320081 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
CLIP4-201ENST00000320081 BMP2KQ9NSY1 1161 aaPredicted RBP18.95■□□□□ 0.62
CLIP4-201ENST00000320081 IBSPP21815 317 aaPredicted RBP18.95■□□□□ 0.62
CLIP4-201ENST00000320081 CGNQ9P2M7 1197 aaKnown RBP18.95■□□□□ 0.62
CLIP4-201ENST00000320081 LRMPQ12912 555 aa18.95■□□□□ 0.62
CLIP4-201ENST00000320081 LRRC24Q50LG9 513 aa18.95■□□□□ 0.62
CLIP4-201ENST00000320081 GPAA1O43292 621 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 CASQ1P31415 396 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 PICALMQ13492 652 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 NAA16Q6N069 864 aaPredicted RBP18.94■□□□□ 0.62
CLIP4-201ENST00000320081 KIF5CO60282 957 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 GTF2F1P35269 517 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLIP4-201ENST00000320081 MTIF2P46199 727 aaKnown RBP18.94■□□□□ 0.62
CLIP4-201ENST00000320081 PTPN21Q16825 1174 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 KCNG4Q8TDN1 519 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 LEO1Q8WVC0 666 aaPredicted RBP18.94■□□□□ 0.62
CLIP4-201ENST00000320081 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 SETD1BQ9UPS6 1966 aaKnown RBP18.94■□□□□ 0.62
CLIP4-201ENST00000320081 LZTFL1Q9NQ48 299 aa18.94■□□□□ 0.62
CLIP4-201ENST00000320081 NEURL1BA8MQ27 555 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 ZSCAN12O43309 604 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 CACNA2D4Q7Z3S7 1137 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 HEATR3Q7Z4Q2 680 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 FTOQ9C0B1 505 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLIP4-201ENST00000320081 KAT14Q9H8E8 782 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 ZFYP08048 801 aaPredicted RBP18.93■□□□□ 0.62
CLIP4-201ENST00000320081 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 TCERG1LQ5VWI1 586 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 SYT10Q6XYQ8 523 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 TTC37Q6PGP7 1564 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 RRAGBQ5VZM2 374 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 CBX8Q9HC52 389 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
CLIP4-201ENST00000320081 MYO1BO43795 1136 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 DDB1Q16531 1140 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 LEKR1Q6ZMV7 388 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 RPGRQ92834 1020 aaKnown RBP18.92■□□□□ 0.62
CLIP4-201ENST00000320081 C8orf37Q96NL8 207 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 PUS3Q9BZE2 481 aaKnown RBP18.92■□□□□ 0.62
CLIP4-201ENST00000320081 DYNC1I1O14576 645 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 PI16Q6UXB8 463 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 TMEM132AQ24JP5 1023 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 CCDC178Q5BJE1 867 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
CLIP4-201ENST00000320081 TTC6Q86TZ1 520 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 ESR2Q92731 530 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 TEX13AQ9BXU3 409 aaPredicted RBP18.91■□□□□ 0.62
CLIP4-201ENST00000320081 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 LARGE1O95461 756 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 MCM7P33993 719 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 MCM6Q14566 821 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 ZNF622Q969S3 477 aaKnown RBP eCLIP18.91■□□□□ 0.62
CLIP4-201ENST00000320081 KCNJ14Q9UNX9 436 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 KCNQ4P56696 695 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 ZNF445P59923 1031 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 PPARDQ03181 441 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms