RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 SNAP23O00161 211 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 SGSM2O43147 1006 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 EPB41L2O43491 1005 aaKnown RBP15.21■□□□□ 0.03
PTPN6-201ENST00000318974 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
PTPN6-201ENST00000318974 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 KBTBD3Q8NAB2 608 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 RFX7Q2KHR2 1363 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 KLRG2A4D1S0 409 aaPredicted RBP15.21■□□□□ 0.03
PTPN6-201ENST00000318974 GOLIM4O00461 696 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 UQCRFS1P1P0C7P4 283 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 UBE4AQ14139 1066 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 CCDC102BQ68D86 513 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 RBM17Q96I25 401 aaKnown RBP15.21■□□□□ 0.03
PTPN6-201ENST00000318974 ANKRD2Q9GZV1 360 aa15.21■□□□□ 0.03
PTPN6-201ENST00000318974 MCCP23508 829 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 BRIP1Q9BX63 1249 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 CWC22Q9HCG8 908 aaKnown RBP15.2■□□□□ 0.02
PTPN6-201ENST00000318974 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 ARID4AP29374 1257 aaPredicted RBP15.2■□□□□ 0.02
PTPN6-201ENST00000318974 PHKA1P46020 1223 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 ANAPC15P60006 121 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPN6-201ENST00000318974 SCARF1Q14162 830 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
PTPN6-201ENST00000318974 TICAM2Q86XR7 235 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 IL25Q9H293 177 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
PTPN6-201ENST00000318974 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
PTPN6-201ENST00000318974 NUCB2P80303 420 aa15.19■□□□□ 0.02
PTPN6-201ENST00000318974 MCAMP43121 646 aa15.19■□□□□ 0.02
PTPN6-201ENST00000318974 ZAP70P43403 619 aa15.19■□□□□ 0.02
PTPN6-201ENST00000318974 NMIQ13287 307 aaPredicted RBP15.19■□□□□ 0.02
PTPN6-201ENST00000318974 IL27Q8NEV9 243 aa15.19■□□□□ 0.02
PTPN6-201ENST00000318974 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
PTPN6-201ENST00000318974 RAD50Q92878 1312 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 QSER1Q2KHR3 1735 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 NRXN2Q9P2S2 1712 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 IL17RAQ96F46 866 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 FAM227BQ96M60 508 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
PTPN6-201ENST00000318974 GOLGA6L3A6NEY3 463 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 PDE6BP35913 854 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 KCNJ4P48050 445 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 MCM2P49736 904 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 BBOX1O75936 387 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
PTPN6-201ENST00000318974 ISY1Q9ULR0 285 aaKnown RBP15.17■□□□□ 0.02
PTPN6-201ENST00000318974 TAF1P21675 1872 aa15.17■□□□□ 0.02
PTPN6-201ENST00000318974 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
PTPN6-201ENST00000318974 BCAMP50895 628 aa15.16■□□□□ 0.02
PTPN6-201ENST00000318974 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
PTPN6-201ENST00000318974 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
PTPN6-201ENST00000318974 CAVIN4Q5BKX8 364 aa15.16■□□□□ 0.02
PTPN6-201ENST00000318974 LSG1Q9H089 658 aaKnown RBP15.16■□□□□ 0.02
PTPN6-201ENST00000318974 NPR1P16066 1061 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
PTPN6-201ENST00000318974 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 ZNF804BA4D1E1 1349 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 WTIPA6NIX2 430 aaPredicted RBP15.15■□□□□ 0.02
PTPN6-201ENST00000318974 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
PTPN6-201ENST00000318974 SRGNP10124 158 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 TMC4Q7Z404 712 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 SLC16A10Q8TF71 515 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
PTPN6-201ENST00000318974 ANKIB1Q9P2G1 1089 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
PTPN6-201ENST00000318974 RNF113AO15541 343 aaKnown RBP15.14■□□□□ 0.01
PTPN6-201ENST00000318974 GYG1P46976 350 aa15.14■□□□□ 0.01
PTPN6-201ENST00000318974 NEK4P51957 841 aa15.14■□□□□ 0.01
PTPN6-201ENST00000318974 RASGRF1Q13972 1273 aa15.14■□□□□ 0.01
PTPN6-201ENST00000318974 XDHP47989 1333 aa15.14■□□□□ 0.01
PTPN6-201ENST00000318974 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
PTPN6-201ENST00000318974 ZFYP08048 801 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-201ENST00000318974 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-201ENST00000318974 PDGFDQ9GZP0 370 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-201ENST00000318974 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
PTPN6-201ENST00000318974 CHGBP05060 677 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
PTPN6-201ENST00000318974 CCDC171Q6TFL3 1326 aa15.13■□□□□ 0.01
PTPN6-201ENST00000318974 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
PTPN6-201ENST00000318974 ZSCAN25Q6NSZ9 544 aa15.12■□□□□ 0.01
PTPN6-201ENST00000318974 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
PTPN6-201ENST00000318974 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
PTPN6-201ENST00000318974 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
PTPN6-201ENST00000318974 HSPA4P34932 840 aa15.12■□□□□ 0.01
PTPN6-201ENST00000318974 GPSM2P81274 684 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms