RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 PANK2Q9BZ23 570 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 GPHNQ9NQX3 736 aaPredicted RBP15.4■□□□□ 0.06
NBPF3-201ENST00000318220 TBC1D22AQ8WUA7 517 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 EP400NLQ6ZTU2 488 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 ZBTB21Q9ULJ3 1066 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 ATG3Q9NT62 314 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 KIF22Q14807 665 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 ZBTB38Q8NAP3 1195 aaPredicted RBP15.39■□□□□ 0.05
NBPF3-201ENST00000318220 RLBP1P12271 317 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 METAP2P50579 478 aaKnown RBP eCLIP15.39■□□□□ 0.05
NBPF3-201ENST00000318220 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
NBPF3-201ENST00000318220 CIAPIN1Q6FI81 312 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 MARCH10Q8NA82 808 aaPredicted RBP15.39■□□□□ 0.05
NBPF3-201ENST00000318220 RXRAP19793 462 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 SSRP1Q08945 709 aaKnown RBP15.39■□□□□ 0.05
NBPF3-201ENST00000318220 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
NBPF3-201ENST00000318220 CHRNDQ07001 517 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 ZNF277Q9NRM2 450 aaPredicted RBP15.38■□□□□ 0.05
NBPF3-201ENST00000318220 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 ANKARQ7Z5J8 1434 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 PDE1AP54750 535 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 SYCP1Q15431 976 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 ORC3Q9UBD5 711 aaPredicted RBP15.38■□□□□ 0.05
NBPF3-201ENST00000318220 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
NBPF3-201ENST00000318220 BACH1O14867 736 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 BBOX1O75936 387 aa15.38■□□□□ 0.05
NBPF3-201ENST00000318220 MCM5P33992 734 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 PDILTQ8N807 584 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 RNF214Q8ND24 703 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 B4DLN1 442 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 MRPL12P52815 198 aaKnown RBP15.37■□□□□ 0.05
NBPF3-201ENST00000318220 SH2D4AQ9H788 454 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 ZNF804BA4D1E1 1349 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 DDX11L8A8MPP1 907 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
NBPF3-201ENST00000318220 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 CCDC12Q8WUD4 166 aaPredicted RBP15.37■□□□□ 0.05
NBPF3-201ENST00000318220 TCHPQ9BT92 498 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 BABAM1Q9NWV8 329 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 IGSF1Q8N6C5 1336 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
NBPF3-201ENST00000318220 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 KDM5CP41229 1560 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 NAPAP54920 295 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 CEP85Q6P2H3 762 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 ZBTB43O43298 467 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 ZAP70P43403 619 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 WDR70Q9NW82 654 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 RNF113AO15541 343 aaKnown RBP15.36■□□□□ 0.05
NBPF3-201ENST00000318220 HMGB1P09429 215 aaKnown RBP15.36■□□□□ 0.05
NBPF3-201ENST00000318220 OTUD7BQ6GQQ9 843 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 KRT23Q9C075 422 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
NBPF3-201ENST00000318220 TMEM266Q2M3C6 531 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 LRRC24Q50LG9 513 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 TNNI3KQ59H18 835 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 DCAF15Q66K64 600 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 MAGEC2Q9UBF1 373 aaPredicted RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 FPGT-TNNI3KV9GXZ4 949 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 SLC1A4P43007 532 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 HLFQ16534 295 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 PRPF40AO75400 957 aaKnown RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 CALM1P0DP23 149 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 CALM2P0DP24 149 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 CALM3P0DP25 149 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 NPR1P16066 1061 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 KRT85P78386 507 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 FAM47CQ5HY64 1035 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 ZSCAN31Q96LW9 406 aaPredicted RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
NBPF3-201ENST00000318220 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
NBPF3-201ENST00000318220 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 SNAP23O00161 211 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 NMIQ13287 307 aaPredicted RBP15.34■□□□□ 0.05
NBPF3-201ENST00000318220 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
NBPF3-201ENST00000318220 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 CCDC129Q6ZRS4 1044 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
NBPF3-201ENST00000318220 PNMA6EA0A0J9YXQ4 647 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 SDSP20132 328 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 STIM1Q13586 685 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 SPATA5Q8NB90 893 aa15.34■□□□□ 0.05
NBPF3-201ENST00000318220 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms