RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CCDC174Q6PII3 467 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 SEPT14Q6ZU15 432 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 TM6SF1Q9BZW5 370 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 PSD3Q9NYI0 1048 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 KIF26BQ2KJY2 2108 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 HMGB2P26583 209 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 CHMP4BP1P59074 171 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 TMEM132EQ6IEE7 984 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 BCL2L12Q9HB09 334 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 BATF3Q9NR55 127 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 GPATCH8Q9UKJ3 1502 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 MAP2K1Q02750 393 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 SEMA3FQ13275 785 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 CFAP70Q5T0N1 1121 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC155Q8N6L0 562 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 FBXW7Q969H0 707 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 TTC12Q9H892 705 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 QRICH2Q9H0J4 1663 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 ATP11AP98196 1134 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 FAM160A1Q05DH4 1040 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.13□□□□□ -1.593e-9■□□□□ 10.6
CNOT1-201ENST00000317147 FSD1Q9BTV5 496 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 STIM2Q9P246 746 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 DDX41Q9UJV9 622 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 RTEL1-TNFRSF6BF6WH68 1400 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 MAGI3Q5TCQ9 1506 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 ERBB4Q15303 1308 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 SEPT7Q16181 437 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 NUTM2AQ8IVF1 878 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 CACNA2D3Q8IZS8 1091 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 LMBR1Q8WVP7 490 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 CABS1Q96KC9 395 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 RAB34Q9BZG1 259 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 ACTR5Q9H9F9 607 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 VEZTQ9HBM0 779 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 SAMD15Q9P1V8 674 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 NCOA3Q9Y6Q9 1424 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 FLOT1O75955 427 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 GNG11P61952 73 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 PSME1Q06323 249 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 LRRC45Q96CN5 670 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 NACAP1Q9BZK3 213 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 RTL1A6NKG5 1358 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 PZPP20742 1482 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 ESPL1Q14674 2120 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 KRBA2Q6ZNG9 492 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 MRPS27Q92552 414 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 NECTIN2Q92692 538 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 TRIM7Q9C029 511 aa5.13□□□□□ -1.59
CNOT1-201ENST00000317147 NUCKS1Q9H1E3 243 aaKnown RBP5.13□□□□□ -1.59
CNOT1-201ENST00000317147 PREX2Q70Z35 1606 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 ACTN2P35609 894 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 NAP1L1P55209 391 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 ENOX2Q16206 610 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 GPATCH11Q8N954 259 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 SYCP2Q9BX26 1530 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TMPOP42166 694 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC129Q6ZRS4 1044 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 GAS2L3Q86XJ1 694 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 DCTPP1Q9H773 170 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC9Q9Y3X0 531 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 JRKLQ9Y4A0 524 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 MORC2Q9Y6X9 1032 aaPredicted RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 GOLGA8KD6RF30 607 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 NT5C2P49902 561 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC102BQ68D86 513 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 ZNF365Q70YC5 407 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC110Q8TBZ0 833 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TMX3Q96JJ7 454 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TBC1D2BQ9UPU7 963 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PLCB4Q15147 1175 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 MCTP2Q6DN12 878 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PHLDB2Q86SQ0 1253 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 C3orf20Q8ND61 904 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC12Q8WUD4 166 aaPredicted RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 RNF14Q9UBS8 474 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 SCN1AP35498 2009 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC69A6NI79 296 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 SYT1P21579 422 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 ZNF75DP51815 510 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 NBPF10Q6P3W6 841 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TRPM2O94759 1503 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PSMD7P51665 324 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 HSP90AA5PQ58FG0 334 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PODNQ7Z5L7 613 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 RAB3IPQ96QF0 476 aaPredicted RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC77Q9BR77 488 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 SELENOOQ9BVL4 669 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TNNQ9UQP3 1299 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 SETBP1Q9Y6X0 1596 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 ATG2BQ96BY7 2078 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PIK3R4Q99570 1358 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 RIOK3O14730 519 aaKnown RBP5.12□□□□□ -1.59
CNOT1-201ENST00000317147 PPP2R5BQ15173 497 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 TRIML1Q8N9V2 468 aa5.12□□□□□ -1.59
CNOT1-201ENST00000317147 VCX3AQ9NNX9 186 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms