RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 BCAMP50895 628 aa18.99■□□□□ 0.63
CALR-201ENST00000316448 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
CALR-201ENST00000316448 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
CALR-201ENST00000316448 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 HSPA4P34932 840 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 CCDC129Q6ZRS4 1044 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 CYP2E1P05181 493 aaPredicted RBP18.98■□□□□ 0.63
CALR-201ENST00000316448 SLC15A2Q16348 729 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 MSL1Q68DK7 614 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 NLGN1Q8N2Q7 840 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 ARAP2Q8WZ64 1704 aa18.98■□□□□ 0.63
CALR-201ENST00000316448 A0A1B0GUL6 1792 aa18.97■□□□□ 0.63
CALR-201ENST00000316448 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
CALR-201ENST00000316448 RASEFQ8IZ41 740 aa18.97■□□□□ 0.63
CALR-201ENST00000316448 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
CALR-201ENST00000316448 PIH1D3Q9NQM4 214 aaKnown RBP18.97■□□□□ 0.63
CALR-201ENST00000316448 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
CALR-201ENST00000316448 ANAPC15P60006 121 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 ST5P78524 1137 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 KLRK1P26718 216 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 GRAPQ13588 217 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
CALR-201ENST00000316448 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
CALR-201ENST00000316448 KLRG2A4D1S0 409 aaPredicted RBP18.95■□□□□ 0.62
CALR-201ENST00000316448 RNF113AO15541 343 aaKnown RBP18.95■□□□□ 0.62
CALR-201ENST00000316448 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 MCCP23508 829 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 GYG1P46976 350 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 UBE4AQ14139 1066 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 MAP4K1Q92918 833 aa18.95■□□□□ 0.62
CALR-201ENST00000316448 MMP10P09238 476 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 NECTIN1Q15223 517 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 SNX14Q9Y5W7 946 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 MCMDC2Q4G0Z9 681 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 PDGFDQ9GZP0 370 aaPredicted RBP18.94■□□□□ 0.62
CALR-201ENST00000316448 CHMP5Q9NZZ3 219 aa18.94■□□□□ 0.62
CALR-201ENST00000316448 SPATA5Q8NB90 893 aa18.93■□□□□ 0.62
CALR-201ENST00000316448 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
CALR-201ENST00000316448 FAM84BQ96KN1 310 aaPredicted RBP18.93■□□□□ 0.62
CALR-201ENST00000316448 IQSEC3Q9UPP2 1182 aaPredicted RBP18.93■□□□□ 0.62
CALR-201ENST00000316448 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
CALR-201ENST00000316448 M0R2C6 588 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
CALR-201ENST00000316448 RPGRQ92834 1020 aaKnown RBP18.92■□□□□ 0.62
CALR-201ENST00000316448 KCNB2Q92953 911 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 ZNF804BA4D1E1 1349 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 ST18O60284 1047 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
CALR-201ENST00000316448 TXNRD3Q86VQ6 643 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 NRXN2Q9P2S2 1712 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 IRS2Q9Y4H2 1338 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 TAF6LQ9Y6J9 622 aa18.92■□□□□ 0.62
CALR-201ENST00000316448 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 MAST3O60307 1309 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
CALR-201ENST00000316448 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 FBXO33Q7Z6M2 555 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 TICAM2Q86XR7 235 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 ANKRD2Q9GZV1 360 aa18.91■□□□□ 0.62
CALR-201ENST00000316448 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
CALR-201ENST00000316448 MYO5AQ9Y4I1 1855 aaKnown RBP18.91■□□□□ 0.62
CALR-201ENST00000316448 BAG6P46379 1132 aa18.9■□□□□ 0.62
CALR-201ENST00000316448 COL9A3Q14050 684 aaPredicted RBP18.9■□□□□ 0.62
CALR-201ENST00000316448 RBM17Q96I25 401 aaKnown RBP18.9■□□□□ 0.62
CALR-201ENST00000316448 CREB3L3Q68CJ9 461 aa18.9■□□□□ 0.62
CALR-201ENST00000316448 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
CALR-201ENST00000316448 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
CALR-201ENST00000316448 WWC3Q9ULE0 1092 aa18.9■□□□□ 0.62
CALR-201ENST00000316448 NEK4P51957 841 aa18.89■□□□□ 0.61
CALR-201ENST00000316448 ADCK5Q3MIX3 580 aa18.89■□□□□ 0.61
CALR-201ENST00000316448 UPF3BQ9BZI7 483 aaKnown RBP18.89■□□□□ 0.61
CALR-201ENST00000316448 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
CALR-201ENST00000316448 COL1A1P02452 1464 aaPredicted RBP18.89■□□□□ 0.61
CALR-201ENST00000316448 SLC27A2O14975 620 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 ADD2P35612 726 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 GPSM2P81274 684 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
CALR-201ENST00000316448 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 FOXP2O15409 715 aa18.88■□□□□ 0.61
CALR-201ENST00000316448 IDH1O75874 414 aaKnown RBP18.88■□□□□ 0.61
CALR-201ENST00000316448 TTF1Q15361 905 aaPredicted RBP18.88■□□□□ 0.61
CALR-201ENST00000316448 GPR101Q96P66 508 aaPredicted RBP18.88■□□□□ 0.61
CALR-201ENST00000316448 A0A0G2JLW4 131 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 TCRBV5S4A2TA0A5A2 114 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
CALR-201ENST00000316448 CPA1P15085 419 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 KCNJ4P48050 445 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 WASHC4Q2M389 1173 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 APPBP2Q92624 585 aa18.87■□□□□ 0.61
CALR-201ENST00000316448 SRGNP10124 158 aa18.86■□□□□ 0.61
CALR-201ENST00000316448 PDE6AP16499 860 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms