RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 TRMT112Q9UI30 125 aaKnown RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 USP42Q9H9J4 1324 aaKnown RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 ZPR1O75312 459 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 C16orf71Q8IYS4 520 aaPredicted RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 PDGFDQ9GZP0 370 aaPredicted RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 SIL1Q9H173 461 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 DCTPP1Q9H773 170 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 RBM28Q9NW13 759 aaKnown RBP9.29□□□□□ -0.92
GFM1-202ENST00000312756 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
GFM1-202ENST00000312756 SETDB1Q15047 1291 aa9.28□□□□□ -0.92
GFM1-202ENST00000312756 COL23A1Q86Y22 540 aaPredicted RBP9.28□□□□□ -0.92
GFM1-202ENST00000312756 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
GFM1-202ENST00000312756 OTUD7AQ8TE49 926 aaPredicted RBP9.28□□□□□ -0.92
GFM1-202ENST00000312756 SSH3Q8TE77 659 aa9.28□□□□□ -0.92
GFM1-202ENST00000312756 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
GFM1-202ENST00000312756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.92
GFM1-202ENST00000312756 CASZ1Q86V15 1759 aa9.28□□□□□ -0.92
GFM1-202ENST00000312756 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
GFM1-202ENST00000312756 COL4A1P02462 1669 aa9.28□□□□□ -0.92
GFM1-202ENST00000312756 NRDCO43847 1150 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 CAPN15O75808 1086 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 NTSR2O95665 410 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 PCCAP05165 728 aaPredicted RBP9.27□□□□□ -0.92
GFM1-202ENST00000312756 GYS1P13807 737 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 AMHR2Q16671 573 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 CCDC94Q9BW85 323 aaPredicted RBP9.27□□□□□ -0.92
GFM1-202ENST00000312756 TAF1P21675 1872 aa9.27□□□□□ -0.92
GFM1-202ENST00000312756 ESPNB1AK53 854 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 GOLIM4O00461 696 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 IRS4O14654 1257 aaPredicted RBP9.27□□□□□ -0.93
GFM1-202ENST00000312756 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.93
GFM1-202ENST00000312756 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
GFM1-202ENST00000312756 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
GFM1-202ENST00000312756 NUCB1Q02818 461 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 KCNA1Q09470 495 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
GFM1-202ENST00000312756 PNPLA7Q6ZV29 1317 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 MYH3P11055 1940 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 HMMRO75330 724 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 SSFA2P28290 1259 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 MTX1Q13505 466 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 NFIXQ14938 502 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 FAM161AQ3B820 660 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 RABL6Q3YEC7 729 aaPredicted RBP9.26□□□□□ -0.93
GFM1-202ENST00000312756 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
GFM1-202ENST00000312756 UTP14AQ9BVJ6 771 aaKnown RBP9.26□□□□□ -0.93
GFM1-202ENST00000312756 IL1RAPL2Q9NP60 686 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 ZNF652Q9Y2D9 606 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 CEP83Q9Y592 693 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 ABCC12Q96J65 1359 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 COL24A1Q17RW2 1714 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 ABCB7O75027 752 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 GCC1Q96CN9 775 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 SGSM3Q96HU1 749 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 GREM2Q9H772 168 aa9.26□□□□□ -0.93
GFM1-202ENST00000312756 SH3TC1Q8TE82 1336 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 PTPN12Q05209 780 aaKnown RBP9.25□□□□□ -0.93
GFM1-202ENST00000312756 TSHZ3Q63HK5 1081 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 CCDC102AQ96A19 550 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 PUS3Q9BZE2 481 aaKnown RBP9.25□□□□□ -0.93
GFM1-202ENST00000312756 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
GFM1-202ENST00000312756 SPEF2Q9C093 1822 aa9.25□□□□□ -0.93
GFM1-202ENST00000312756 TNRC6CQ9HCJ0 1690 aaKnown RBP9.25□□□□□ -0.93
GFM1-202ENST00000312756 LAMB2P55268 1798 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 GPR37O15354 613 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 KDM4AO75164 1064 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 DDR1Q08345 913 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 MTA1Q13330 715 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
GFM1-202ENST00000312756 SLC15A2Q16348 729 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 PARP10Q53GL7 1025 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 STK32BQ9NY57 414 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 SRCAPQ6ZRS2 3230 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 CDHR2Q9BYE9 1310 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
GFM1-202ENST00000312756 SASH1O94885 1247 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 BRD1O95696 1058 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 CTSWP56202 376 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 LRRC24Q50LG9 513 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 ANKRD23Q86SG2 305 aa9.24□□□□□ -0.93
GFM1-202ENST00000312756 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
GFM1-202ENST00000312756 PDE8AO60658 829 aa9.23□□□□□ -0.93
GFM1-202ENST00000312756 CSF1RP07333 972 aa9.23□□□□□ -0.93
GFM1-202ENST00000312756 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
GFM1-202ENST00000312756 TSPAN18Q96SJ8 248 aa9.23□□□□□ -0.93
GFM1-202ENST00000312756 ITGA6P23229 1130 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms