RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARHGAP6O43182 974 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 MYH7P12883 1935 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 CNGA1P29973 690 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 EIF3DO15371 548 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 TSPOAP1O95153 1857 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 TACC1O75410 805 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 PPFIA1Q13136 1202 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 UTP14CQ5TAP6 766 aaKnown RBP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 TMEM87BQ96K49 555 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 ZNF608Q9ULD9 1512 aaPredicted RBP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
COL6A5-202ENST00000312481 PTCH1Q13635 1447 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 CACNA2D4Q7Z3S7 1137 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
COL6A5-202ENST00000312481 ERVK-7P63135 1459 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 ESR2Q92731 530 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 VTI1AQ96AJ9 217 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 MSH5O43196 834 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 IARSP41252 1262 aaKnown RBP10.03□□□□□ -0.8
COL6A5-202ENST00000312481 MICAL3Q7RTP6 2002 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 NUP88Q99567 741 aaPredicted RBP10.03□□□□□ -0.8
COL6A5-202ENST00000312481 CSRNP2Q9H175 543 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 MAGI3Q5TCQ9 1506 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 TYRO3Q06418 890 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 LTV1Q96GA3 475 aaPredicted RBP10.03□□□□□ -0.8
COL6A5-202ENST00000312481 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 PPP1R1BQ9UD71 204 aaPredicted RBP10.03□□□□□ -0.8
COL6A5-202ENST00000312481 MLKLQ8NB16 471 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 OSBPL3Q9H4L5 887 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 LRRC7Q96NW7 1537 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 TBC1D5Q92609 795 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 NLRP1Q9C000 1473 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 SNRPA1P09661 255 aaKnown RBP10.03□□□□□ -0.8
COL6A5-202ENST00000312481 GNA11P29992 359 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.8
COL6A5-202ENST00000312481 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.8
COL6A5-202ENST00000312481 PLCB1Q9NQ66 1216 aa10.02□□□□□ -0.8
COL6A5-202ENST00000312481 GRM8O00222 908 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 SKILP12757 684 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 GJB2P29033 226 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 UBASH3AP57075 661 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 KIF5AQ12840 1032 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 SH2D4BQ5SQS7 431 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 MAP2K1Q02750 393 aaPredicted RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 MTMR3Q13615 1198 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 ATP10DQ9P241 1426 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 SDSP20132 328 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 KSR2Q6VAB6 950 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 RUFY3Q7L099 469 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 TRMT2AQ8IZ69 625 aaKnown RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 GPR161Q8N6U8 529 aaKnown RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 MSANTD4Q8NCY6 345 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 LRRFIP2Q9Y608 721 aaKnown RBP10.02□□□□□ -0.81
COL6A5-202ENST00000312481 MYH3P11055 1940 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 ABCC12Q96J65 1359 aa10.02□□□□□ -0.81
COL6A5-202ENST00000312481 ANKRD62A6NC57 917 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 B4DLN1 442 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 MRPL12P52815 198 aaKnown RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 MRFAP1L1Q96HT8 127 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 GNA14O95837 355 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 TNNC1P63316 161 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 ABCC4O15439 1325 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 RBM6P78332 1123 aaKnown RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 TMTC1Q8IUR5 882 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 GABPB2Q8TAK5 448 aaPredicted RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 CCDC110Q8TBZ0 833 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 RNF14Q9UBS8 474 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 USP19O94966 1318 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 RASSF2P50749 326 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 ENOX2Q16206 610 aaKnown RBP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 MFSD6Q6ZSS7 791 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 ABCA6Q8N139 1617 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 RASSF4Q9H2L5 321 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 UBA7P41226 1012 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 KCNJ6P48051 423 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 IFFO1Q0D2I5 559 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 KIAA1524Q8TCG1 905 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms