RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 CUL4AQ13619 759 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 MCMDC2Q4G0Z9 681 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
RETREG3-201ENST00000309428 GTPBP4Q9BZE4 634 aaKnown RBP14.76□□□□□ -0.05
RETREG3-201ENST00000309428 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 SCAND2PQ9GZW5 306 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 HIP1O00291 1037 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 SFPQP23246 707 aaKnown RBP eCLIP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 MIGA1Q8NAN2 632 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 ZSCAN31Q96LW9 406 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.75□□□□□ -0.05
RETREG3-201ENST00000309428 TECPR2O15040 1411 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 RPS6KB1P23443 525 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 DMTNQ08495 405 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 GPS2Q13227 327 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 CFAP100Q494V2 611 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 CBX8Q9HC52 389 aa14.75□□□□□ -0.05
RETREG3-201ENST00000309428 ITSN1Q15811 1721 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 ZAP70P43403 619 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 TRDNQ13061 729 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 FSIP1Q8NA03 581 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 NCOA3Q9Y6Q9 1424 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 hCG_1642624A0A1W2PR95 340 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 DENND2AQ9ULE3 1009 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 AOPEPQ8N6M6 819 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 GOLGA6L1Q8N7Z2 621 aa14.74□□□□□ -0.05
RETREG3-201ENST00000309428 KLF18A0A0U1RQI7 1052 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 NR1I2O75469 434 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
RETREG3-201ENST00000309428 DNAI1Q9UI46 699 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 PTPDC1A2A3K4 754 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 CCDC69A6NI79 296 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SPECC1Q5M775 1068 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SLC9C2Q5TAH2 1124 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 TMCO3Q6UWJ1 677 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 CCAR1Q8IX12 1150 aaKnown RBP14.73□□□□□ -0.05
RETREG3-201ENST00000309428 A0A1B0GVL5 298 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SNW1Q13573 536 aaKnown RBP14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SCARF1Q14162 830 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 NECTIN1Q15223 517 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 SYT10Q6XYQ8 523 aa14.73□□□□□ -0.05
RETREG3-201ENST00000309428 NOL10Q9BSC4 688 aaKnown RBP14.73□□□□□ -0.05
RETREG3-201ENST00000309428 ZNF215Q9UL58 517 aaPredicted RBP14.73□□□□□ -0.05
RETREG3-201ENST00000309428 DHX37Q8IY37 1157 aaKnown RBP14.72□□□□□ -0.05
RETREG3-201ENST00000309428 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 TTC14Q96N46 770 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 AIFM3Q96NN9 605 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 NRXN3Q9Y4C0 1643 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 ARID5BQ14865 1188 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 AGLP35573 1532 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 LMOD1P29536 600 aaPredicted RBP14.72□□□□□ -0.05
RETREG3-201ENST00000309428 CCDC34Q96HJ3 373 aa14.72□□□□□ -0.05
RETREG3-201ENST00000309428 IL2RBP14784 551 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 PHKBQ93100 1093 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 XAGE2Q96GT9 111 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 MPHOSPH8Q99549 860 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
RETREG3-201ENST00000309428 ZNF335Q9H4Z2 1342 aaPredicted RBP14.71□□□□□ -0.05
RETREG3-201ENST00000309428 PDE4CQ08493 712 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 HLFQ16534 295 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.05
RETREG3-201ENST00000309428 CFAP45Q9UL16 551 aa14.71□□□□□ -0.05
RETREG3-201ENST00000309428 HOXB7P09629 217 aa14.71□□□□□ -0.06
RETREG3-201ENST00000309428 PLBD2Q8NHP8 589 aa14.71□□□□□ -0.06
RETREG3-201ENST00000309428 OGFRQ9NZT2 677 aa14.71□□□□□ -0.06
RETREG3-201ENST00000309428 SCRN1Q12765 414 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 ANKRD1Q15327 319 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 CPLX3Q8WVH0 158 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 RPAP1Q9BWH6 1393 aaPredicted RBP14.7□□□□□ -0.06
RETREG3-201ENST00000309428 TOB2Q14106 344 aaPredicted RBP14.7□□□□□ -0.06
RETREG3-201ENST00000309428 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 ST3GAL1Q11201 340 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 ARHGAP29Q52LW3 1261 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 STOX1Q6ZVD7 989 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 KIAA1524Q8TCG1 905 aa14.7□□□□□ -0.06
RETREG3-201ENST00000309428 ORC3Q9UBD5 711 aaPredicted RBP14.7□□□□□ -0.06
RETREG3-201ENST00000309428 SMTNL1A8MU46 457 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 RASSF8Q8NHQ8 419 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 GREM2Q9H772 168 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 EYA2O00167 538 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 KIF20AO95235 890 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-201ENST00000309428 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 NPHP4O75161 1426 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-201ENST00000309428 M0R2C6 588 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 ZNF213O14771 459 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 IBSPP21815 317 aaPredicted RBP14.69□□□□□ -0.06
RETREG3-201ENST00000309428 OSBP2Q969R2 916 aa14.69□□□□□ -0.06
RETREG3-201ENST00000309428 B4E1Z4 1266 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms