RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 MBD4O95243 580 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 PHRF1Q9P1Y6 1649 aaKnown RBP10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 ZNF532Q9HCE3 1301 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 H3BQV1 296 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 SLC27A2O14975 620 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 GPAA1O43292 621 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 PRKAB2O43741 272 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 SERPINB2P05120 415 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 MAP3K12Q12852 859 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 IFFO2Q5TF58 517 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 NAPBQ9H115 298 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 PHLPP1O60346 1717 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 RAD50Q92878 1312 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 ERVV-1B6SEH8 477 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 CPLX1O14810 134 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 RNF113AO15541 343 aaKnown RBP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 LARGE1O95461 756 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 RASGRF1Q13972 1273 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 MCM4P33991 863 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 RBM5P52756 815 aaKnown RBP eCLIP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 APOBRQ0VD83 1088 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 HAUS7Q99871 368 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 PIH1D3Q9NQM4 214 aaKnown RBP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 NEK1Q96PY6 1258 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 MYL10Q9BUA6 226 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 TFIP11Q9UBB9 837 aaKnown RBP10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 NARFQ9UHQ1 456 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 RIPOR2Q9Y4F9 1068 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 MMP10P09238 476 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 Q6ZUG5 572 aa10.22□□□□□ -0.77
LCLAT1-201ENST00000309052 SALL3Q9BXA9 1300 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 M0R2C6 588 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 ZNF213O14771 459 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 TRAK2O60296 914 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 UFL1O94874 794 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 CYP2E1P05181 493 aaPredicted RBP10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 LPIN2Q92539 896 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 HMG20BQ9P0W2 317 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 DENND2AQ9ULE3 1009 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 CYP21A2P08686 494 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 HSPA4P34932 840 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 MICU3Q86XE3 530 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 SPATA5Q8NB90 893 aa10.21□□□□□ -0.77
LCLAT1-201ENST00000309052 CYP2D7A0A087X1C5 515 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 GOLGA6L4A6NEF3 574 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 NTSR2O95665 410 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 RBM6P78332 1123 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 DOK7Q18PE1 504 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 CAVIN1Q6NZI2 390 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 TXNRD3Q86VQ6 643 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 SLC4A4Q9Y6R1 1079 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 RANBP6O60518 1105 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 PSMA5P28066 241 aa10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 LRRFIP1Q32MZ4 808 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 LARP1BQ659C4 914 aaKnown RBP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 AATFQ9NY61 560 aaKnown RBP eCLIP10.21□□□□□ -0.78
LCLAT1-201ENST00000309052 MPNDQ8N594 471 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 PDGFDQ9GZP0 370 aaPredicted RBP10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 UTYO14607 1347 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 HSPD1P10809 573 aaKnown RBP10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 ST5P78524 1137 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 ATP2B2Q01814 1243 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 TRIM28Q13263 835 aaKnown RBP10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 IMMTQ16891 758 aaKnown RBP10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 OTUD7BQ6GQQ9 843 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 MAST3O60307 1309 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 B4E1Z4 1266 aa10.2□□□□□ -0.78
LCLAT1-201ENST00000309052 FGAP02671 866 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 GJB2P29033 226 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 CMTR1Q8N1G2 835 aaKnown RBP10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 RNF214Q8ND24 703 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 NYXQ9GZU5 481 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 MINPP1Q9UNW1 487 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 JAK2O60674 1132 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 PDE6AP16499 860 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 DYNLL1P63167 89 aaKnown RBP10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 EZH2Q15910 746 aaKnown RBP10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
LCLAT1-201ENST00000309052 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 SMIM22K7EJ46 135 aa10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 CSF1RP07333 972 aa10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 GSE1Q14687 1217 aa10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 NAA16Q6N069 864 aaPredicted RBP10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 PRDX5P30044 214 aa10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 HIBADHP31937 336 aaKnown RBP10.18□□□□□ -0.78
LCLAT1-201ENST00000309052 PICALMQ13492 652 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms