RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 OTUD7BQ6GQQ9 843 aa24.52■■□□□ 1.52
RELA-201ENST00000308639 TOM1L2Q6ZVM7 507 aa24.52■■□□□ 1.52
RELA-201ENST00000308639 IL15P40933 162 aaPredicted RBP24.52■■□□□ 1.52
RELA-201ENST00000308639 FBXW7Q969H0 707 aa24.52■■□□□ 1.52
RELA-201ENST00000308639 HELLSQ9NRZ9 838 aa24.52■■□□□ 1.52
RELA-201ENST00000308639 PI16Q6UXB8 463 aa24.51■■□□□ 1.51
RELA-201ENST00000308639 TNS3Q68CZ2 1445 aa24.51■■□□□ 1.51
RELA-201ENST00000308639 PKD1L3Q7Z443 1732 aa24.51■■□□□ 1.51
RELA-201ENST00000308639 C11orf57Q6ZUT1 292 aaPredicted RBP24.51■■□□□ 1.51
RELA-201ENST00000308639 DSCC1Q9BVC3 393 aa24.51■■□□□ 1.51
RELA-201ENST00000308639 SCARF1Q14162 830 aa24.5■■□□□ 1.51
RELA-201ENST00000308639 CCAR1Q8IX12 1150 aaKnown RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 ZCRB1Q8TBF4 217 aaKnown RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 TJP1Q07157 1748 aa24.5■■□□□ 1.51
RELA-201ENST00000308639 A0A0U1RQG5 324 aaPredicted RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 RNF113AO15541 343 aaKnown RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 PDIA3P30101 505 aaKnown RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 ZSCAN16Q9H4T2 348 aaPredicted RBP24.5■■□□□ 1.51
RELA-201ENST00000308639 ZNF75DP51815 510 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 ILDR1Q86SU0 546 aaPredicted RBP24.49■■□□□ 1.51
RELA-201ENST00000308639 ZNF710Q8N1W2 664 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 MAP7D2Q96T17 732 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 SPATA31A3Q5VYP0 1347 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 SYNE4Q8N205 404 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 CFAP45Q9UL16 551 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 TAOK2Q9UL54 1235 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 LAMB4A4D0S4 1761 aa24.49■■□□□ 1.51
RELA-201ENST00000308639 GJB4Q9NTQ9 266 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 GOLGA6L6A8MZA4 724 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 FOXP2O15409 715 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 PRDM11Q9NQV5 511 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 HMGB1P09429 215 aaKnown RBP24.48■■□□□ 1.51
RELA-201ENST00000308639 WASHC4Q2M389 1173 aa24.48■■□□□ 1.51
RELA-201ENST00000308639 TDRD7Q8NHU6 1098 aaKnown RBP24.47■■□□□ 1.51
RELA-201ENST00000308639 FAM89AQ96GI7 184 aa24.47■■□□□ 1.51
RELA-201ENST00000308639 PRIMPOLQ96LW4 560 aa24.47■■□□□ 1.51
RELA-201ENST00000308639 LLPHQ9BRT6 129 aaKnown RBP24.47■■□□□ 1.51
RELA-201ENST00000308639 FDPSP14324 419 aaKnown RBP24.47■■□□□ 1.51
RELA-201ENST00000308639 CCDC144BQ3MJ40 725 aa24.47■■□□□ 1.51
RELA-201ENST00000308639 PLA2G4DQ86XP0 818 aa24.47■■□□□ 1.51
RELA-201ENST00000308639 CCDC144CPQ8IYA2 1237 aa24.47■■□□□ 1.51
RELA-201ENST00000308639 CCDC191Q8NCU4 936 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 AGXT2Q9BYV1 514 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 NUP188Q5SRE5 1749 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 GORABQ5T7V8 394 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 CEP126Q9P2H0 1117 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 RCOR1Q9UKL0 485 aa24.46■■□□□ 1.51
RELA-201ENST00000308639 ARID5BQ14865 1188 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 NAA16Q6N069 864 aaPredicted RBP24.45■■□□□ 1.5
RELA-201ENST00000308639 XAGE2Q96GT9 111 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 GPR108Q9NPR9 543 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 SALL1Q9NSC2 1324 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 SNW1Q13573 536 aaKnown RBP24.45■■□□□ 1.5
RELA-201ENST00000308639 STRN4Q9NRL3 753 aa24.45■■□□□ 1.5
RELA-201ENST00000308639 RIOK3O14730 519 aaKnown RBP24.44■■□□□ 1.5
RELA-201ENST00000308639 ME1P48163 572 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 HMGN5P82970 282 aaKnown RBP24.44■■□□□ 1.5
RELA-201ENST00000308639 TTC39AQ5SRH9 613 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 DENND2AQ9ULE3 1009 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 CCDC57Q2TAC2 916 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 KLHL34Q8N239 644 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 CARMIL3Q8ND23 1372 aa24.44■■□□□ 1.5
RELA-201ENST00000308639 ZAP70P43403 619 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 IQCB1Q15051 598 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 ZSCAN25Q6NSZ9 544 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 PUS7LQ9H0K6 701 aaKnown RBP24.43■■□□□ 1.5
RELA-201ENST00000308639 CLIP2Q9UDT6 1046 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 KCPQ6ZWJ8 1503 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 CACTINQ8WUQ7 758 aaKnown RBP24.43■■□□□ 1.5
RELA-201ENST00000308639 C16orf45Q96MC5 204 aaPredicted RBP24.43■■□□□ 1.5
RELA-201ENST00000308639 MYH15Q9Y2K3 1946 aa24.43■■□□□ 1.5
RELA-201ENST00000308639 POLR3DP05423 398 aaPredicted RBP24.42■■□□□ 1.5
RELA-201ENST00000308639 FSIP1Q8NA03 581 aa24.42■■□□□ 1.5
RELA-201ENST00000308639 NKX2-3Q8TAU0 364 aa24.42■■□□□ 1.5
RELA-201ENST00000308639 WDR17Q8IZU2 1322 aa24.42■■□□□ 1.5
RELA-201ENST00000308639 TPM3P06753 285 aa24.42■■□□□ 1.5
RELA-201ENST00000308639 BCL11BQ9C0K0 894 aaPredicted RBP24.42■■□□□ 1.5
RELA-201ENST00000308639 FGAP02671 866 aa24.41■■□□□ 1.5
RELA-201ENST00000308639 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
RELA-201ENST00000308639 BCL2L12Q9HB09 334 aa24.41■■□□□ 1.5
RELA-201ENST00000308639 KIF3AQ9Y496 699 aa24.41■■□□□ 1.5
RELA-201ENST00000308639 CCDC73Q6ZRK6 1079 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 NWD2Q9ULI1 1742 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 A0A1B0GVL5 298 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 CIAO1O76071 339 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 CCDC158Q5M9N0 1113 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 ABCC6O95255 1503 aa24.4■■□□□ 1.5
RELA-201ENST00000308639 ERVV-2B6SEH9 535 aa24.39■■□□□ 1.5
RELA-201ENST00000308639 GPTP24298 496 aa24.39■■□□□ 1.5
RELA-201ENST00000308639 ENGASEQ8NFI3 743 aa24.39■■□□□ 1.5
RELA-201ENST00000308639 ZNF274Q96GC6 653 aaPredicted RBP24.39■■□□□ 1.5
RELA-201ENST00000308639 PCDHA7Q9UN72 937 aa24.39■■□□□ 1.5
RELA-201ENST00000308639 CPDO75976 1380 aa24.39■■□□□ 1.5
RELA-201ENST00000308639 KLF18A0A0U1RQI7 1052 aa24.39■■□□□ 1.49
RELA-201ENST00000308639 GTF2F1P35269 517 aaKnown RBP eCLIP24.39■■□□□ 1.49
RELA-201ENST00000308639 TAF7LQ5H9L4 462 aa24.39■■□□□ 1.49
RELA-201ENST00000308639 ISCA1Q9BUE6 129 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms