RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 B4E1Z4 1266 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 DNA2P51530 1060 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
PHTF2-203ENST00000307305 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
PHTF2-203ENST00000307305 TMEM2Q9UHN6 1383 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 MED14O60244 1454 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 ADGRB3O60242 1522 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 FILIP1LQ4L180 1135 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
PHTF2-203ENST00000307305 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 TRIM34Q9BYJ4 488 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
PHTF2-203ENST00000307305 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CDKL5O76039 1030 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 SLU7O95391 586 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 STAMQ92783 540 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 LZTFL1Q9NQ48 299 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 TBX22Q9Y458 520 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 E7EWF7 191 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 ADD1P35611 737 aaKnown RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 USP6P35125 1406 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 XBP1P17861 261 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
PHTF2-203ENST00000307305 TTC14Q96N46 770 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 JAG2Q9Y219 1238 aa13.1□□□□□ -0.31
PHTF2-203ENST00000307305 GSDMDP57764 484 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 ATP7BP35670 1465 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 ZBTB43O43298 467 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 MCM6Q14566 821 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
PHTF2-203ENST00000307305 CASQ1P31415 396 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 IL15P40933 162 aaPredicted RBP13.09□□□□□ -0.31
PHTF2-203ENST00000307305 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 CPS1P31327 1500 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 TERF1P54274 439 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 POLA2Q14181 598 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
PHTF2-203ENST00000307305 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
PHTF2-203ENST00000307305 PHACTR2O75167 634 aa13.08□□□□□ -0.31
PHTF2-203ENST00000307305 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.31
PHTF2-203ENST00000307305 PGBD1Q96JS3 809 aa13.08□□□□□ -0.31
PHTF2-203ENST00000307305 AIFM3Q96NN9 605 aa13.08□□□□□ -0.31
PHTF2-203ENST00000307305 ZAP70P43403 619 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.32
PHTF2-203ENST00000307305 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
PHTF2-203ENST00000307305 ZNF202O95125 648 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 NDUFA8P51970 172 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
PHTF2-203ENST00000307305 DHX58Q96C10 678 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 BRMS1Q9HCU9 246 aa13.08□□□□□ -0.32
PHTF2-203ENST00000307305 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 NEMFO60524 1076 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 PTPRMP28827 1452 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 COBLO75128 1261 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 NOL10Q9BSC4 688 aaKnown RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 ADORA1P30542 326 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 DPCR1Q3MIW9 517 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
PHTF2-203ENST00000307305 PLIN2Q99541 437 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
PHTF2-203ENST00000307305 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
PHTF2-203ENST00000307305 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms