RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 NBPF4Q96M43 638 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 FEZ1Q99689 392 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 EPS15P42566 896 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 KIAA1328Q86T90 577 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 NGLY1Q96IV0 654 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 ZBTB43O43298 467 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 RXRAP19793 462 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 TRIM34Q9BYJ4 488 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 METP08581 1390 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 H0YHG0 523 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 NR1I2O75469 434 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 PODXL2Q9NZ53 605 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 OGFRQ9NZT2 677 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 PYCARDQ9ULZ3 195 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 ZDHHC9Q9Y397 364 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 NLRP1Q9C000 1473 aa15.3■□□□□ 0.04
DDX54-201ENST00000306014 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
DDX54-201ENST00000306014 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
DDX54-201ENST00000306014 ZFYP08048 801 aaPredicted RBP15.3■□□□□ 0.04
DDX54-201ENST00000306014 BEND3Q5T5X7 828 aa15.3■□□□□ 0.04
DDX54-201ENST00000306014 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
DDX54-201ENST00000306014 PLEKHG1Q9ULL1 1385 aa15.3■□□□□ 0.04
DDX54-201ENST00000306014 CCDC181Q5TID7 509 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 LAMC1P11047 1609 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
DDX54-201ENST00000306014 SLC9C2Q5TAH2 1124 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 ZBTB9Q96C00 473 aa15.29■□□□□ 0.04
DDX54-201ENST00000306014 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 TANGO6Q9C0B7 1094 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 AFMP43652 599 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 ZNF790Q6PG37 636 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 MFSD6Q6ZSS7 791 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 ATP7BP35670 1465 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 LARGE1O95461 756 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 CCDC148Q8NFR7 591 aa15.28■□□□□ 0.04
DDX54-201ENST00000306014 TTF1Q15361 905 aaPredicted RBP15.27■□□□□ 0.04
DDX54-201ENST00000306014 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.04
DDX54-201ENST00000306014 UTP14AQ9BVJ6 771 aaKnown RBP15.27■□□□□ 0.04
DDX54-201ENST00000306014 E9PCH4 1651 aa15.27■□□□□ 0.04
DDX54-201ENST00000306014 ABCA6Q8N139 1617 aa15.27■□□□□ 0.04
DDX54-201ENST00000306014 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 LMAN1P49257 510 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 ELF2Q15723 593 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 GTF3C6Q969F1 213 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.03
DDX54-201ENST00000306014 LLPHQ9BRT6 129 aaKnown RBP15.27■□□□□ 0.03
DDX54-201ENST00000306014 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.03
DDX54-201ENST00000306014 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.03
DDX54-201ENST00000306014 GCKRQ14397 625 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
DDX54-201ENST00000306014 ERO1AQ96HE7 468 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 SLC5A1P13866 664 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 ATL3Q6DD88 541 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 NRBP1Q9UHY1 535 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
DDX54-201ENST00000306014 RNF41Q9H4P4 317 aaPredicted RBP15.26■□□□□ 0.03
DDX54-201ENST00000306014 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
DDX54-201ENST00000306014 N4BP3O15049 544 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 MCM6Q14566 821 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 PDLIM2Q96JY6 352 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 TIGD1Q96MW7 591 aa15.25■□□□□ 0.03
DDX54-201ENST00000306014 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
DDX54-201ENST00000306014 GIGYF1O75420 1035 aaPredicted RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 ZHX3Q9H4I2 956 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 MRVI1Q9Y6F6 885 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 WTAPQ15007 396 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 KANK3Q6NY19 840 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 MAP4K1Q92918 833 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 USP28Q96RU2 1077 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 RNF17Q9BXT8 1623 aaKnown RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 SSBP05455 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX54-201ENST00000306014 NLRP5P59047 1200 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 MYL5Q02045 173 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
DDX54-201ENST00000306014 SOGA3Q5TF21 947 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 SLAIN2Q9P270 581 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
DDX54-201ENST00000306014 YEATS4O95619 227 aa15.23■□□□□ 0.03
DDX54-201ENST00000306014 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
DDX54-201ENST00000306014 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms