RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 C3orf67Q6ZVT6 689 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 NECAB1Q8N987 351 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 DSCC1Q9BVC3 393 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 MROH5Q6ZUA9 1318 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 HSPA1LP34931 641 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 CCDC102BQ68D86 513 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 CERKQ8TCT0 537 aa7.82□□□□□ -1.16
USP47-201ENST00000305481 GJD4Q96KN9 370 aaPredicted RBP7.82□□□□□ -1.16
USP47-201ENST00000305481 ZSCAN31Q96LW9 406 aaPredicted RBP7.82□□□□□ -1.16
USP47-201ENST00000305481 SH2B1Q9NRF2 756 aaPredicted RBP7.82□□□□□ -1.16
USP47-201ENST00000305481 RTL9Q8NET4 1388 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 GOLGA6L22H0YM25 854 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 PTMSP20962 102 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 PUM3Q15397 648 aaKnown RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 ERFEQ4G0M1 354 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 NEK1Q96PY6 1258 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 PUS7LQ9H0K6 701 aaKnown RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 LAMB2P55268 1798 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 PRPF40AO75400 957 aaKnown RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 SYT1P21579 422 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 ARID4AP29374 1257 aaPredicted RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 KRT32Q14532 448 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 KLHL40Q2TBA0 621 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 CCDC152Q4G0S7 254 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 TTLL5Q6EMB2 1281 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 LPIN2Q92539 896 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 PIH1D3Q9NQM4 214 aaKnown RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 ZNF652Q9Y2D9 606 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 RC3H1Q5TC82 1133 aaKnown RBP7.81□□□□□ -1.16
USP47-201ENST00000305481 TBC1D9BQ66K14 1250 aa7.81□□□□□ -1.16
USP47-201ENST00000305481 ONECUT3O60422 494 aaPredicted RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 RPS6KA4O75676 772 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 ZFYP08048 801 aaPredicted RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 GPT2Q8TD30 523 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 SRP68Q9UHB9 627 aaKnown RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 SMC3Q9UQE7 1217 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 DDX49Q9Y6V7 483 aaKnown RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 ARAP2Q8WZ64 1704 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 AFF2P51816 1311 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 WDR33Q9C0J8 1336 aaKnown RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 GJB2P29033 226 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 APPBP2Q92624 585 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 MPHOSPH8Q99549 860 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 MYO5AQ9Y4I1 1855 aaKnown RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 LAMA4Q16363 1823 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 WTIPA6NIX2 430 aaPredicted RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 ANKRD1Q15327 319 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 Q6ZUG5 572 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 GAS2L3Q86XJ1 694 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
USP47-201ENST00000305481 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
USP47-201ENST00000305481 SCN7AQ01118 1682 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 E7EWF7 191 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 STX6O43752 255 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 ZSCAN22P10073 491 aaPredicted RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 ADD2P35612 726 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 EXOSC10Q01780 885 aaKnown RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 LRRC2Q9BYS8 371 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 MYH7P12883 1935 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 TCRBV5S4A2TA0A5A2 114 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 RGL2O15211 777 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 GNPATO15228 680 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 FGAP02671 866 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 CHRNDQ07001 517 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 RASGRF1Q13972 1273 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 SLC9C2Q5TAH2 1124 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 MEX3CQ5U5Q3 659 aaKnown RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 TAF1P21675 1872 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 SBF2Q86WG5 1849 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 ATRNO75882 1429 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 UQCRFS1P1P0C7P4 283 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 XRCC6P12956 609 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP47-201ENST00000305481 LRRFIP1Q32MZ4 808 aaKnown RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 SLC10A5Q5PT55 438 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 DHX32Q7L7V1 743 aaKnown RBP7.79□□□□□ -1.16
USP47-201ENST00000305481 KLHL34Q8N239 644 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 BRPF3Q9ULD4 1205 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 WWC3Q9ULE0 1092 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 MTMR6Q9Y217 621 aa7.79□□□□□ -1.16
USP47-201ENST00000305481 GOLGA6L3A6NEY3 463 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 GPAA1O43292 621 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 SLC5A1P13866 664 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
USP47-201ENST00000305481 IGHMBP2P38935 993 aaKnown RBP7.78□□□□□ -1.16
USP47-201ENST00000305481 BCAMP50895 628 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 STK3Q13188 491 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 TTF1Q15361 905 aaPredicted RBP7.78□□□□□ -1.16
USP47-201ENST00000305481 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 ARHGEF1Q92888 912 aaKnown RBP7.78□□□□□ -1.16
USP47-201ENST00000305481 LY75O60449 1722 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 CASZ1Q86V15 1759 aa7.78□□□□□ -1.16
USP47-201ENST00000305481 IDH1O75874 414 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms