RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FSD2A1L4K1 749 aa23.14■■□□□ 1.3
HOXC4-201ENST00000303406 CHGBP05060 677 aa23.14■■□□□ 1.3
HOXC4-201ENST00000303406 HSPD1P10809 573 aaKnown RBP23.14■■□□□ 1.3
HOXC4-201ENST00000303406 SLC5A1P13866 664 aa23.14■■□□□ 1.3
HOXC4-201ENST00000303406 SCARF1Q14162 830 aa23.14■■□□□ 1.3
HOXC4-201ENST00000303406 GJD4Q96KN9 370 aaPredicted RBP23.14■■□□□ 1.3
HOXC4-201ENST00000303406 MPHOSPH8Q99549 860 aa23.14■■□□□ 1.3
HOXC4-201ENST00000303406 LARGE1O95461 756 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 IGHMBP2P38935 993 aaKnown RBP23.13■■□□□ 1.29
HOXC4-201ENST00000303406 MCAMP43121 646 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 ME3Q16798 604 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 SF3B3Q15393 1217 aaKnown RBP23.13■■□□□ 1.29
HOXC4-201ENST00000303406 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 OSBP2Q969R2 916 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 NARFQ9UHQ1 456 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 CTNNA3Q9UI47 895 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 TPCN1Q9ULQ1 816 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
HOXC4-201ENST00000303406 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
HOXC4-201ENST00000303406 M0R2C6 588 aa23.12■■□□□ 1.29
HOXC4-201ENST00000303406 TOB2Q14106 344 aaPredicted RBP23.12■■□□□ 1.29
HOXC4-201ENST00000303406 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
HOXC4-201ENST00000303406 CCDC83Q8IWF9 413 aa23.12■■□□□ 1.29
HOXC4-201ENST00000303406 CDC5LQ99459 802 aaKnown RBP23.12■■□□□ 1.29
HOXC4-201ENST00000303406 TAF1LQ8IZX4 1826 aa23.11■■□□□ 1.29
HOXC4-201ENST00000303406 ADD2P35612 726 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 ST3GAL1Q11201 340 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 UBE3CQ15386 1083 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 MEX3CQ5U5Q3 659 aaKnown RBP23.1■■□□□ 1.29
HOXC4-201ENST00000303406 NYXQ9GZU5 481 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 DDX49Q9Y6V7 483 aaKnown RBP23.1■■□□□ 1.29
HOXC4-201ENST00000303406 LAMA4Q16363 1823 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 DOCK2Q92608 1830 aa23.1■■□□□ 1.29
HOXC4-201ENST00000303406 GOLGA6L3A6NEY3 463 aa23.09■■□□□ 1.29
HOXC4-201ENST00000303406 STX6O43752 255 aa23.09■■□□□ 1.29
HOXC4-201ENST00000303406 ZSCAN22P10073 491 aaPredicted RBP23.09■■□□□ 1.29
HOXC4-201ENST00000303406 SEC31BQ9NQW1 1179 aa23.09■■□□□ 1.29
HOXC4-201ENST00000303406 TRPC5Q9UL62 973 aaPredicted RBP23.09■■□□□ 1.29
HOXC4-201ENST00000303406 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 DHX32Q7L7V1 743 aaKnown RBP23.08■■□□□ 1.29
HOXC4-201ENST00000303406 BCL2L12Q9HB09 334 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 ATP6V1DQ9Y5K8 247 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 AFF2P51816 1311 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 A0A1B0GUL6 1792 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 CASZ1Q86V15 1759 aa23.08■■□□□ 1.29
HOXC4-201ENST00000303406 SYT1P21579 422 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 GJB2P29033 226 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 PHKA1P46020 1223 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 WASHC4Q2M389 1173 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 FBXL16Q8N461 479 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 AGXT2Q9BYV1 514 aa23.08■■□□□ 1.28
HOXC4-201ENST00000303406 CCNL1Q9UK58 526 aaPredicted RBP23.08■■□□□ 1.28
HOXC4-201ENST00000303406 MBD3O95983 291 aa23.07■■□□□ 1.28
HOXC4-201ENST00000303406 PDCP20941 246 aa23.07■■□□□ 1.28
HOXC4-201ENST00000303406 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
HOXC4-201ENST00000303406 STOX1Q6ZVD7 989 aa23.07■■□□□ 1.28
HOXC4-201ENST00000303406 LARP6Q9BRS8 491 aaKnown RBP23.07■■□□□ 1.28
HOXC4-201ENST00000303406 GZF1Q9H116 711 aaPredicted RBP23.07■■□□□ 1.28
HOXC4-201ENST00000303406 ERFEQ4G0M1 354 aa23.06■■□□□ 1.28
HOXC4-201ENST00000303406 PTF1AQ7RTS3 328 aa23.06■■□□□ 1.28
HOXC4-201ENST00000303406 TMEM87AQ8NBN3 555 aa23.06■■□□□ 1.28
HOXC4-201ENST00000303406 PRPF40AO75400 957 aaKnown RBP23.05■■□□□ 1.28
HOXC4-201ENST00000303406 EXOSC10Q01780 885 aaKnown RBP23.05■■□□□ 1.28
HOXC4-201ENST00000303406 PI16Q6UXB8 463 aa23.05■■□□□ 1.28
HOXC4-201ENST00000303406 CHMP4CQ96CF2 233 aa23.05■■□□□ 1.28
HOXC4-201ENST00000303406 RTCBQ9Y3I0 505 aaKnown RBP23.05■■□□□ 1.28
HOXC4-201ENST00000303406 C4BP0C0L5 1744 aa23.05■■□□□ 1.28
HOXC4-201ENST00000303406 E7EWF7 191 aa23.04■■□□□ 1.28
HOXC4-201ENST00000303406 F13A1P00488 732 aa23.04■■□□□ 1.28
HOXC4-201ENST00000303406 HSPA1LP34931 641 aa23.04■■□□□ 1.28
HOXC4-201ENST00000303406 COL9A3Q14050 684 aaPredicted RBP23.04■■□□□ 1.28
HOXC4-201ENST00000303406 IMMTQ16891 758 aaKnown RBP23.04■■□□□ 1.28
HOXC4-201ENST00000303406 Q6ZUG5 572 aa23.04■■□□□ 1.28
HOXC4-201ENST00000303406 SPATA5Q8NB90 893 aa23.04■■□□□ 1.28
HOXC4-201ENST00000303406 PUS7LQ9H0K6 701 aaKnown RBP23.04■■□□□ 1.28
HOXC4-201ENST00000303406 PIH1D3Q9NQM4 214 aaKnown RBP23.04■■□□□ 1.28
HOXC4-201ENST00000303406 FOXP2O15409 715 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 GPAA1O43292 621 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 CHRNDQ07001 517 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 TBC1D9BQ66K14 1250 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 NECAB1Q8N987 351 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
HOXC4-201ENST00000303406 GTF3C6Q969F1 213 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 BSDC1Q9NW68 430 aaPredicted RBP23.03■■□□□ 1.28
HOXC4-201ENST00000303406 MTMR6Q9Y217 621 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 GNPATO15228 680 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 ZPR1O75312 459 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 ZMYM6O95789 1325 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 MRE11P49959 708 aa23.03■■□□□ 1.28
HOXC4-201ENST00000303406 LLPHQ9BRT6 129 aaKnown RBP23.03■■□□□ 1.28
HOXC4-201ENST00000303406 WDR19Q8NEZ3 1342 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 PDE6AP16499 860 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 UBE4AQ14139 1066 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 TCEANC2Q96MN5 208 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
HOXC4-201ENST00000303406 C4AP0C0L4 1744 aa23.01■■□□□ 1.27
HOXC4-201ENST00000303406 TCRBV5S4A2TA0A5A2 114 aa23.01■■□□□ 1.27
HOXC4-201ENST00000303406 ZNF445P59923 1031 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms