RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SNAP23O00161 211 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 NUCB2P80303 420 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 AMIGO3Q86WK7 504 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 GBP4Q96PP9 640 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 CPA1P15085 419 aa17.33■□□□□ 0.37
SHCBP1-201ENST00000303383 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.37
SHCBP1-201ENST00000303383 CNBD1Q8NA66 436 aa17.33■□□□□ 0.37
SHCBP1-201ENST00000303383 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.37
SHCBP1-201ENST00000303383 C4BP0C0L5 1744 aa17.33■□□□□ 0.37
SHCBP1-201ENST00000303383 LY75O60449 1722 aa17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 RXRBP28702 533 aa17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 AK2P54819 239 aa17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.36
SHCBP1-201ENST00000303383 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 FGFR2P21802 821 aa17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 ZGPATQ8N5A5 531 aaKnown RBP17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 BSDC1Q9NW68 430 aaPredicted RBP17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
SHCBP1-201ENST00000303383 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 FGD1P98174 961 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 APBA3O96018 575 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 NFIXQ14938 502 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 APPBP2Q92624 585 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 ZSWIM6Q9HCJ5 1215 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 MAST3O60307 1309 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 DDIT3P35638 169 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 SPATA5Q8NB90 893 aa17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
SHCBP1-201ENST00000303383 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 KCNB2Q92953 911 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 RAB3GAP1Q15042 981 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 CYP2E1P05181 493 aaPredicted RBP17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 BCAMP50895 628 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 MAP3K12Q12852 859 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
SHCBP1-201ENST00000303383 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 MCM4P33991 863 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 BRWD3Q6RI45 1802 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 LAMB2P55268 1798 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 M0R2C6 588 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 HSPD1P10809 573 aaKnown RBP17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 ST5P78524 1137 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 UBE4AQ14139 1066 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 INTS4Q96HW7 963 aaKnown RBP17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 TTC14Q96N46 770 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 NEK1Q96PY6 1258 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
SHCBP1-201ENST00000303383 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 APPP05067 770 aa17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 RASGRF1Q13972 1273 aa17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 LRP5O75197 1615 aa17.28■□□□□ 0.36
SHCBP1-201ENST00000303383 CUL4AQ13619 759 aa17.27■□□□□ 0.36
SHCBP1-201ENST00000303383 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
SHCBP1-201ENST00000303383 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
SHCBP1-201ENST00000303383 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
SHCBP1-201ENST00000303383 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
SHCBP1-201ENST00000303383 CYP21A2P08686 494 aa17.27■□□□□ 0.35
SHCBP1-201ENST00000303383 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.35
SHCBP1-201ENST00000303383 GPAA1O43292 621 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 ADD2P35612 726 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 GYS1P13807 737 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 SERPINB2P05120 415 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 GYG1P46976 350 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 TSGA10IPQ3SY00 556 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
SHCBP1-201ENST00000303383 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 PDE6AP16499 860 aa17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 HMGB1P09429 215 aaKnown RBP17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 UBE3CQ15386 1083 aa17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 FOXD4L5Q5VV16 416 aaPredicted RBP17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 FOXD4L4Q8WXT5 416 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 614.6 ms