RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SUCLG2Q96I99 432 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 BICC1Q9H694 974 aaKnown RBP15.11■□□□□ 0.01
TVP23A-201ENST00000299866 SLC3A2P08195 630 aaKnown RBP15.11■□□□□ 0.01
TVP23A-201ENST00000299866 TSGA10IPQ3SY00 556 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 SERPINC1P01008 464 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
TVP23A-201ENST00000299866 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 MYO1CO00159 1063 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 DPF2Q92785 391 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 ZSWIM4Q9H7M6 989 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 SNRKQ9NRH2 765 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 USP6P35125 1406 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 USP31Q70CQ4 1352 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 CCP110O43303 1012 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 PFKFB2O60825 505 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 TUBB4AP04350 444 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 GNG11P61952 73 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 AIMP1Q12904 312 aaKnown RBP15.1■□□□□ 0.01
TVP23A-201ENST00000299866 CFAP100Q494V2 611 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 MUM1L1Q5H9M0 696 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
TVP23A-201ENST00000299866 SRRTQ9BXP5 876 aaKnown RBP15.1■□□□□ 0.01
TVP23A-201ENST00000299866 ARFGAP3Q9NP61 516 aa15.1■□□□□ 0.01
TVP23A-201ENST00000299866 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 TPM1P09493 284 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 UBASH3AP57075 661 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 NLRP6P59044 892 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 CLIC4Q9Y696 253 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 COL15A1P39059 1388 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
TVP23A-201ENST00000299866 CASQ1P31415 396 aa15.08■□□□□ 0.01
TVP23A-201ENST00000299866 NCAPHQ15003 741 aa15.08■□□□□ 0.01
TVP23A-201ENST00000299866 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0.01
TVP23A-201ENST00000299866 ADALQ6DHV7 355 aa15.08■□□□□ 0.01
TVP23A-201ENST00000299866 AK7Q96M32 723 aa15.08■□□□□ 0.01
TVP23A-201ENST00000299866 LLPHQ9BRT6 129 aaKnown RBP15.08■□□□□ 0.01
TVP23A-201ENST00000299866 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
TVP23A-201ENST00000299866 ITSN1Q15811 1721 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 CRYBG1Q9Y4K1 1723 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 KCNJ6P48051 423 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
TVP23A-201ENST00000299866 NLRP12P59046 1061 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 PPP2R3AQ06190 1150 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 WDR24Q96S15 920 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
TVP23A-201ENST00000299866 ADAM21Q9UKJ8 722 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
TVP23A-201ENST00000299866 SPATA31D1Q6ZQQ2 1576 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 PDILTQ8N807 584 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 UBXN6Q9BZV1 441 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 BABAM1Q9NWV8 329 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 TMEM232C9JQI7 657 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 ZNF202O95125 648 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 KAZALD1Q96I82 304 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 ATP8B1O43520 1251 aa15.07■□□□□ 0
TVP23A-201ENST00000299866 GPR161Q8N6U8 529 aaKnown RBP15.07■□□□□ 0
TVP23A-201ENST00000299866 CHD2O14647 1828 aaKnown RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 VWA3AA6NCI4 1184 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 GRM8O00222 908 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 TOP1P11387 765 aaKnown RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 DHX32Q7L7V1 743 aaKnown RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 BTBD11A6QL63 1104 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 ZSCAN12O43309 604 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 HOXC9P31274 260 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 LINC00301Q8NCQ3 95 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 DBF4Q9UBU7 674 aaPredicted RBP15.06■□□□□ 0
TVP23A-201ENST00000299866 PPP2R2CQ9Y2T4 447 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 AKAP12Q02952 1782 aa15.06■□□□□ 0
TVP23A-201ENST00000299866 A0A0G2JLW4 131 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 H3BQF6 201 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 KSR2Q6VAB6 950 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 BPIFA3Q9BQP9 254 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 FUT8Q9BYC5 575 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 RTEL1Q9NZ71 1219 aa15.05■□□□□ 0
TVP23A-201ENST00000299866 SPTLC2O15270 562 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 MCM6Q14566 821 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 ATL3Q6DD88 541 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 GJB4Q9NTQ9 266 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 PRAMEF22A3QJZ6 481 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 DHX8Q14562 1220 aaKnown RBP15.05■□□□□ -0
TVP23A-201ENST00000299866 C14orf37Q86TY3 774 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 GOLGA5Q8TBA6 731 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 VPS18Q9P253 973 aa15.05■□□□□ -0
TVP23A-201ENST00000299866 HDAC5Q9UQL6 1122 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms