RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 DHX32Q7L7V1 743 aaKnown RBP15.76■□□□□ 0.11
CTDP1-202ENST00000299543 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
CTDP1-202ENST00000299543 DDX19AQ9NUU7 478 aaKnown RBP15.76■□□□□ 0.11
CTDP1-202ENST00000299543 A0A1B0GUL7 405 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 GOLGA6L19H0YKK7 550 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 CFAP45Q9UL16 551 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 KDM3BQ7LBC6 1761 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 CCAR1Q8IX12 1150 aaKnown RBP15.75■□□□□ 0.11
CTDP1-202ENST00000299543 CEP126Q9P2H0 1117 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 ANKRD7Q92527 254 aa15.75■□□□□ 0.11
CTDP1-202ENST00000299543 BECN2A8MW95 431 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 TMX1Q9H3N1 280 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 MEGF6O75095 1541 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-202ENST00000299543 HSPD1P10809 573 aaKnown RBP15.74■□□□□ 0.11
CTDP1-202ENST00000299543 RESTQ13127 1097 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
CTDP1-202ENST00000299543 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
CTDP1-202ENST00000299543 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-202ENST00000299543 FOXO4P98177 505 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 CCDC57Q2TAC2 916 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 RABL6Q3YEC7 729 aaPredicted RBP15.73■□□□□ 0.11
CTDP1-202ENST00000299543 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 ELP1O95163 1332 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 E7EWF7 191 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 TTC39AQ5SRH9 613 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 USP28Q96RU2 1077 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 TSGA10IPQ3SY00 556 aa15.73■□□□□ 0.11
CTDP1-202ENST00000299543 NSUN7Q8NE18 718 aaKnown RBP15.73■□□□□ 0.11
CTDP1-202ENST00000299543 PI16Q6UXB8 463 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 KIAA1524Q8TCG1 905 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 ADORA1P30542 326 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
CTDP1-202ENST00000299543 FILIP1Q7Z7B0 1213 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
CTDP1-202ENST00000299543 CLIP2Q9UDT6 1046 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 C1orf167Q5SNV9 1468 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 EYA2O00167 538 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
CTDP1-202ENST00000299543 GPTP24298 496 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 GJB4Q9NTQ9 266 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
CTDP1-202ENST00000299543 APPP05067 770 aa15.71■□□□□ 0.11
CTDP1-202ENST00000299543 FSIP1Q8NA03 581 aa15.71■□□□□ 0.11
CTDP1-202ENST00000299543 ZSCAN16Q9H4T2 348 aaPredicted RBP15.71■□□□□ 0.11
CTDP1-202ENST00000299543 H7C1W4 665 aa15.71■□□□□ 0.11
CTDP1-202ENST00000299543 CCDC158Q5M9N0 1113 aa15.71■□□□□ 0.11
CTDP1-202ENST00000299543 OGFRQ9NZT2 677 aa15.71■□□□□ 0.11
CTDP1-202ENST00000299543 M0R2C6 588 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 RNF113AO15541 343 aaKnown RBP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 CTDNEP1O95476 244 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 CASP7P55210 303 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 ZRSR1Q15695 479 aaKnown RBP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 MAST3O60307 1309 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 CPLX1O14810 134 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 PFKFB2O60825 505 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 SECISBP2LQ93073 1101 aaKnown RBP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 LMO7Q8WWI1 1683 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 EVA1CP58658 441 aa15.7■□□□□ 0.1
CTDP1-202ENST00000299543 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.1
CTDP1-202ENST00000299543 A0A1B0GVL5 298 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 ZNF75DP51815 510 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
CTDP1-202ENST00000299543 ISM2Q6H9L7 571 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
CTDP1-202ENST00000299543 HELLSQ9NRZ9 838 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 CHD2O14647 1828 aaKnown RBP15.69■□□□□ 0.1
CTDP1-202ENST00000299543 BIN1O00499 593 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 TPM3P06753 285 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 ARID5BQ14865 1188 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 GOLPH3LQ9H4A5 285 aa15.69■□□□□ 0.1
CTDP1-202ENST00000299543 RXRAP19793 462 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 TERF2Q15554 542 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
CTDP1-202ENST00000299543 TAF3Q5VWG9 929 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 SPTLC3Q9NUV7 552 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 STK38Q15208 465 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 RALYLQ86SE5 291 aaKnown RBP15.68■□□□□ 0.1
CTDP1-202ENST00000299543 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 XAGE2Q96GT9 111 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
CTDP1-202ENST00000299543 ZNF396Q96N95 335 aaPredicted RBP15.68■□□□□ 0.1
CTDP1-202ENST00000299543 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 ZAP70P43403 619 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 IRX3P78415 501 aaPredicted RBP15.67■□□□□ 0.1
CTDP1-202ENST00000299543 SCARF1Q14162 830 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms