RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.76■■■□□ 2.52
SDCCAG3-201ENST00000298537 ZSWIM6Q9HCJ5 1215 aa30.76■■■□□ 2.52
SDCCAG3-201ENST00000298537 CASZ1Q86V15 1759 aa30.76■■■□□ 2.51
SDCCAG3-201ENST00000298537 ZKSCAN1P17029 563 aaPredicted RBP30.76■■■□□ 2.51
SDCCAG3-201ENST00000298537 MCM2P49736 904 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 PIH1D3Q9NQM4 214 aaKnown RBP30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 HELLSQ9NRZ9 838 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 LARGE1O95461 756 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 CUL4AQ13619 759 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 SLC51AQ86UW1 340 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 PROM2Q8N271 834 aa30.75■■■□□ 2.51
SDCCAG3-201ENST00000298537 HSP90B1P14625 803 aaKnown RBP30.74■■■□□ 2.51
SDCCAG3-201ENST00000298537 MCM4P33991 863 aa30.74■■■□□ 2.51
SDCCAG3-201ENST00000298537 SLC10A5Q5PT55 438 aa30.74■■■□□ 2.51
SDCCAG3-201ENST00000298537 RPAP1Q9BWH6 1393 aaPredicted RBP30.74■■■□□ 2.51
SDCCAG3-201ENST00000298537 BCAMP50895 628 aa30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 CYP21A2P08686 494 aa30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 ARID4AP29374 1257 aaPredicted RBP30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 NFIXQ14938 502 aa30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 CDC5LQ99459 802 aaKnown RBP30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 PUS7LQ9H0K6 701 aaKnown RBP30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 PDRG1Q9NUG6 133 aa30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 HMG20BQ9P0W2 317 aa30.73■■■□□ 2.51
SDCCAG3-201ENST00000298537 SLC5A1P13866 664 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 WASHC4Q2M389 1173 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 ANKRD18AQ8IVF6 992 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 COL24A1Q17RW2 1714 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 MYO5AQ9Y4I1 1855 aaKnown RBP30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 RGL2O15211 777 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 TM6SF1Q9BZW5 370 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 CYP46A1Q9Y6A2 500 aa30.72■■■□□ 2.51
SDCCAG3-201ENST00000298537 HSPD1P10809 573 aaKnown RBP30.71■■■□□ 2.51
SDCCAG3-201ENST00000298537 RASGRF1Q13972 1273 aa30.71■■■□□ 2.51
SDCCAG3-201ENST00000298537 ZNF512BQ96KM6 892 aaPredicted RBP30.71■■■□□ 2.51
SDCCAG3-201ENST00000298537 NYXQ9GZU5 481 aa30.71■■■□□ 2.51
SDCCAG3-201ENST00000298537 FOXP2O15409 715 aa30.7■■■□□ 2.5
SDCCAG3-201ENST00000298537 TPTE2Q6XPS3 522 aa30.7■■■□□ 2.5
SDCCAG3-201ENST00000298537 ZDHHC9Q9Y397 364 aa30.7■■■□□ 2.5
SDCCAG3-201ENST00000298537 IQSEC3Q9UPP2 1182 aaPredicted RBP30.69■■■□□ 2.5
SDCCAG3-201ENST00000298537 RBM6P78332 1123 aaKnown RBP30.69■■■□□ 2.5
SDCCAG3-201ENST00000298537 RNF20Q5VTR2 975 aa30.69■■■□□ 2.5
SDCCAG3-201ENST00000298537 TTLL5Q6EMB2 1281 aa30.69■■■□□ 2.5
SDCCAG3-201ENST00000298537 NLRP3Q96P20 1036 aa30.69■■■□□ 2.5
SDCCAG3-201ENST00000298537 STOX1Q6ZVD7 989 aa30.68■■■□□ 2.5
SDCCAG3-201ENST00000298537 ARAP2Q8WZ64 1704 aa30.68■■■□□ 2.5
SDCCAG3-201ENST00000298537 IDH1O75874 414 aaKnown RBP30.68■■■□□ 2.5
SDCCAG3-201ENST00000298537 MINPP1Q9UNW1 487 aa30.68■■■□□ 2.5
SDCCAG3-201ENST00000298537 U3KPZ7 1027 aaPredicted RBP30.68■■■□□ 2.5
SDCCAG3-201ENST00000298537 FOXD4L5Q5VV16 416 aaPredicted RBP30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 FOXD4L4Q8WXT5 416 aaPredicted RBP30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 CHAMP1Q96JM3 812 aa30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 WWC3Q9ULE0 1092 aa30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 LIMCH1Q9UPQ0 1083 aa30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 UBR3Q6ZT12 1888 aa30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 SPATA5Q8NB90 893 aa30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 BSDC1Q9NW68 430 aaPredicted RBP30.67■■■□□ 2.5
SDCCAG3-201ENST00000298537 TXNRD1Q16881 649 aa30.66■■■□□ 2.5
SDCCAG3-201ENST00000298537 SLC9C2Q5TAH2 1124 aa30.66■■■□□ 2.5
SDCCAG3-201ENST00000298537 CWC22Q9HCG8 908 aaKnown RBP30.66■■■□□ 2.5
SDCCAG3-201ENST00000298537 TNRC6CQ9HCJ0 1690 aaKnown RBP30.66■■■□□ 2.5
SDCCAG3-201ENST00000298537 NPHP1O15259 732 aa30.65■■■□□ 2.5
SDCCAG3-201ENST00000298537 TM4SF1P30408 202 aa30.65■■■□□ 2.5
SDCCAG3-201ENST00000298537 TSGA10IPQ3SY00 556 aa30.65■■■□□ 2.5
SDCCAG3-201ENST00000298537 GYS1P13807 737 aa30.65■■■□□ 2.5
SDCCAG3-201ENST00000298537 UQCRFS1P1P0C7P4 283 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 ADD2P35612 726 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 GYG1P46976 350 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 ST3GAL1Q11201 340 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 BLOC1S2Q6QNY1 142 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 APPBP2Q92624 585 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 DSCC1Q9BVC3 393 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 RPS6KB1P23443 525 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 KLRK1P26718 216 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 SLC27A3Q5K4L6 730 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 ZNF772Q68DY9 489 aaPredicted RBP30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 TPCN1Q9ULQ1 816 aa30.64■■■□□ 2.5
SDCCAG3-201ENST00000298537 ZFYP08048 801 aaPredicted RBP30.63■■■□□ 2.49
SDCCAG3-201ENST00000298537 RPS8P62241 208 aaKnown RBP30.63■■■□□ 2.49
SDCCAG3-201ENST00000298537 ME3Q16798 604 aa30.63■■■□□ 2.49
SDCCAG3-201ENST00000298537 PSMA5P28066 241 aa30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 INTS4Q96HW7 963 aaKnown RBP30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 CARMIL3Q8ND23 1372 aa30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 ZNF532Q9HCE3 1301 aa30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 NECAB1Q8N987 351 aa30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 LRRC2Q9BYS8 371 aa30.62■■■□□ 2.49
SDCCAG3-201ENST00000298537 GPAA1O43292 621 aa30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 TOB2Q14106 344 aaPredicted RBP30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 DEKP35659 375 aaKnown RBP30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 TICAM2Q86XR7 235 aa30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 CCDC83Q8IWF9 413 aa30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 NEK1Q96PY6 1258 aa30.61■■■□□ 2.49
SDCCAG3-201ENST00000298537 MYH7P12883 1935 aa30.6■■■□□ 2.49
SDCCAG3-201ENST00000298537 A0A1B0GUL6 1792 aa30.6■■■□□ 2.49
SDCCAG3-201ENST00000298537 PDE6AP16499 860 aa30.6■■■□□ 2.49
SDCCAG3-201ENST00000298537 ADRA2BP18089 450 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 NUCB2P80303 420 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 PRR5LQ6MZQ0 368 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 CNBD1Q8NA66 436 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 TCRBV5S4A2TA0A5A2 114 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 HAND2P61296 217 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms