RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CWF19L2Q2TBE0 894 aaKnown RBP7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 ARHGAP45Q92619 1136 aa7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 TSNARE1Q96NA8 513 aa7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 ASXL1Q8IXJ9 1541 aa7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
GAPVD1-202ENST00000297933 HCLS1P14317 486 aaPredicted RBP7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 RXRBP28702 533 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 BRF1Q92994 677 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 SBNO2Q9Y2G9 1366 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 PDE8AO60658 829 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 NOP2P46087 812 aaKnown RBP7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 CCDC102BQ68D86 513 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 ALS2CR12Q96Q35 445 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 TAOK3Q9H2K8 898 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 ITGA6P23229 1130 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 CALML3P27482 149 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 CASQ1P31415 396 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 DYDC1Q8WWB3 177 aa7.9□□□□□ -1.14
GAPVD1-202ENST00000297933 WDR62O43379 1518 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 SYCE3A1L190 88 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 KIAA0754O94854 1291 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 STAMBPO95630 424 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 PAFAH1B1P43034 410 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 PRPF4BQ13523 1007 aaKnown RBP7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 C8orf58Q8NAV2 365 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 PLBD2Q8NHP8 589 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 TRPC5Q9UL62 973 aaPredicted RBP7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 MRVI1Q9Y6F6 885 aa7.9□□□□□ -1.15
GAPVD1-202ENST00000297933 BIN1O00499 593 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 ZBED4O75132 1171 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 GNA11P29992 359 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 RRAGBQ5VZM2 374 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 FAM89AQ96GI7 184 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 NAP1L4Q99733 375 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 LRRC2Q9BYS8 371 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 C20orf194Q5TEA3 1177 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 KRT79Q5XKE5 535 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 NUP153P49790 1475 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 KRT2P35908 639 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 MRPL50Q8N5N7 158 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 ZFYVE9O95405 1425 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 NUP160Q12769 1436 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 IRX3P78415 501 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 IFFO1Q0D2I5 559 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 ZNF790Q6PG37 636 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 Q6ZUG5 572 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 DDX19AQ9NUU7 478 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 EIF2AK4Q9P2K8 1649 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 KAT6BQ8WYB5 2073 aa7.89□□□□□ -1.15
GAPVD1-202ENST00000297933 GCOM1H8Y6P7 765 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 MYZAPP0CAP1 466 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 AFMP43652 599 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 WDR66Q8TBY9 1149 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 SMCR8Q8TEV9 937 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 BICC1Q9H694 974 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 TTC12Q9H892 705 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 RBM8AQ9Y5S9 174 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 CSADQ9Y600 493 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 NMIQ13287 307 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 TBC1D9Q6ZT07 1266 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 CCDC24Q8N4L8 307 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 RBM28Q9NW13 759 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 ADAMTS12P58397 1594 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 ASIC1P78348 528 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 STX1AQ16623 288 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 IFI16Q16666 785 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 KIF4BQ2VIQ3 1234 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 SLC5A4Q9NY91 659 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 MAP3K19Q56UN5 1328 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 CTTNBP2Q8WZ74 1663 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 SPOUT1Q5T280 376 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 ISM2Q6H9L7 571 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 CCDC102AQ96A19 550 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 PTPDC1A2A3K4 754 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 AKNAD1Q5T1N1 836 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 USP48Q86UV5 1035 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 RGS22Q8NE09 1264 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 DCPSQ96C86 337 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 GRPEL1Q9HAV7 217 aa7.88□□□□□ -1.15
GAPVD1-202ENST00000297933 DDX21Q9NR30 783 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■□□□□ 8.6
GAPVD1-202ENST00000297933 M0QZ92 97 aa7.87□□□□□ -1.15
GAPVD1-202ENST00000297933 MBD4O95243 580 aa7.87□□□□□ -1.15
GAPVD1-202ENST00000297933 MAP2K1Q02750 393 aaPredicted RBP7.87□□□□□ -1.15
GAPVD1-202ENST00000297933 C2CD5Q86YS7 1000 aa7.87□□□□□ -1.15
GAPVD1-202ENST00000297933 OTUD6BQ8N6M0 293 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms