RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SLIT2O94813 1529 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 CCDC158Q5M9N0 1113 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
RHO-201ENST00000296271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.96□□□□□ -0.17
RHO-201ENST00000296271 ANKRD1Q15327 319 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 CNNM1Q9NRU3 951 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.17
RHO-201ENST00000296271 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
RHO-201ENST00000296271 CTSWP56202 376 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 KRT32Q14532 448 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 PDLIM2Q96JY6 352 aa13.96□□□□□ -0.17
RHO-201ENST00000296271 PHKA1P46020 1223 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 CCDC183Q5T5S1 534 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 DHX32Q7L7V1 743 aaKnown RBP13.95□□□□□ -0.18
RHO-201ENST00000296271 TEX13AQ9BXU3 409 aaPredicted RBP13.95□□□□□ -0.18
RHO-201ENST00000296271 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
RHO-201ENST00000296271 SEC31BQ9NQW1 1179 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 WTIPA6NIX2 430 aaPredicted RBP13.95□□□□□ -0.18
RHO-201ENST00000296271 KCNQ2O43526 872 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 FGAP02671 866 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
RHO-201ENST00000296271 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
RHO-201ENST00000296271 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
RHO-201ENST00000296271 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 COL16A1Q07092 1604 aaPredicted RBP13.94□□□□□ -0.18
RHO-201ENST00000296271 ROBO1Q9Y6N7 1651 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 ITPK1Q13572 414 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 MARCH10Q8NA82 808 aaPredicted RBP13.94□□□□□ -0.18
RHO-201ENST00000296271 NSUN7Q8NE18 718 aaKnown RBP13.94□□□□□ -0.18
RHO-201ENST00000296271 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
RHO-201ENST00000296271 ATP6V1DQ9Y5K8 247 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
RHO-201ENST00000296271 NUP98P52948 1817 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
RHO-201ENST00000296271 ANKRD18BA2A2Z9 1011 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 KDM4AO75164 1064 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
RHO-201ENST00000296271 LRP6O75581 1613 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 AP5Z1O43299 807 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 IDH1O75874 414 aaKnown RBP13.92□□□□□ -0.18
RHO-201ENST00000296271 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 KRT85P78386 507 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 CKAP2LQ8IYA6 745 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 ZNF830Q96NB3 372 aaPredicted RBP13.92□□□□□ -0.18
RHO-201ENST00000296271 NAP1L5Q96NT1 182 aaPredicted RBP13.92□□□□□ -0.18
RHO-201ENST00000296271 GPAA1O43292 621 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
RHO-201ENST00000296271 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 RESTQ13127 1097 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 NBPF3Q9H094 633 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
RHO-201ENST00000296271 H3BQV1 296 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 PFKFB2O60825 505 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
RHO-201ENST00000296271 SLC9C2Q5TAH2 1124 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 IFFO2Q5TF58 517 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
RHO-201ENST00000296271 SPATA32Q96LK8 384 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 FUCA2Q9BTY2 467 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 ANTXR2P58335 489 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 DDB1Q16531 1140 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 ZNF34Q8IZ26 560 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
RHO-201ENST00000296271 CDHR2Q9BYE9 1310 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
RHO-201ENST00000296271 COL4A1P02462 1669 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 A0A087WWV3 80 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 PDE8BO95263 885 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 RXRAP19793 462 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 PDCP20941 246 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 STK11IPQ8N1F8 1099 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 SENP2Q9HC62 589 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 PDE8AO60658 829 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 NR1I2O75469 434 aa13.9□□□□□ -0.18
RHO-201ENST00000296271 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
RHO-201ENST00000296271 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
RHO-201ENST00000296271 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
RHO-201ENST00000296271 MYH14Q7Z406 1995 aaKnown RBP13.9□□□□□ -0.19
RHO-201ENST00000296271 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
RHO-201ENST00000296271 APPBP2Q92624 585 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms