RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PCDHA7Q9UN72 937 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 NDUFA8P51970 172 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 GSDMDP57764 484 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 MNS1Q8NEH6 495 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 RAPGEF4Q8WZA2 1011 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 C8orf76Q96K31 380 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 HMGB1P09429 215 aaKnown RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 CCZ1BP86790 482 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 CCZ1P86791 482 aaPredicted RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 SERPINC1P01008 464 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 NAA16Q6N069 864 aaPredicted RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 DNAI1Q9UI46 699 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 SYCP1Q15431 976 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
CCNF-201ENST00000293968 THEMISQ8N1K5 641 aaPredicted RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
CCNF-201ENST00000293968 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
CCNF-201ENST00000293968 GABPB1Q06547 395 aaPredicted RBP17.11■□□□□ 0.33
CCNF-201ENST00000293968 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
CCNF-201ENST00000293968 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
CCNF-201ENST00000293968 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
CCNF-201ENST00000293968 COL15A1P39059 1388 aa17.11■□□□□ 0.33
CCNF-201ENST00000293968 CTDNEP1O95476 244 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 E7EWF7 191 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 PDILTQ8N807 584 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 ZNF609O15014 1411 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 POLR3GO15318 223 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 GCP02774 474 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 ARHGAP29Q52LW3 1261 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 KBTBD3Q8NAB2 608 aa17.1■□□□□ 0.33
CCNF-201ENST00000293968 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
CCNF-201ENST00000293968 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
CCNF-201ENST00000293968 AGLP35573 1532 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
CCNF-201ENST00000293968 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 UBXN4Q92575 508 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
CCNF-201ENST00000293968 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
CCNF-201ENST00000293968 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
CCNF-201ENST00000293968 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
CCNF-201ENST00000293968 SPTLC2O15270 562 aa17.08■□□□□ 0.33
CCNF-201ENST00000293968 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.33
CCNF-201ENST00000293968 PPP1R13BQ96KQ4 1090 aa17.08■□□□□ 0.33
CCNF-201ENST00000293968 HAUS7Q99871 368 aa17.08■□□□□ 0.33
CCNF-201ENST00000293968 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.32
CCNF-201ENST00000293968 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.32
CCNF-201ENST00000293968 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
CCNF-201ENST00000293968 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
CCNF-201ENST00000293968 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 LRRN4CLQ8ND94 238 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
CCNF-201ENST00000293968 TERF2Q15554 542 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
CCNF-201ENST00000293968 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 ZBTB22O15209 634 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
CCNF-201ENST00000293968 RXRAP19793 462 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 PDIA6Q15084 440 aa17.07■□□□□ 0.32
CCNF-201ENST00000293968 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
CCNF-201ENST00000293968 ZNF202O95125 648 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 APPP05067 770 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 ARMCX5Q6P1M9 558 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
CCNF-201ENST00000293968 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
CCNF-201ENST00000293968 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 FMR1NBQ8N0W7 255 aaPredicted RBP17.05■□□□□ 0.32
CCNF-201ENST00000293968 ARGLU1Q9NWB6 273 aaPredicted RBP17.05■□□□□ 0.32
CCNF-201ENST00000293968 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
CCNF-201ENST00000293968 UBASH3AP57075 661 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 FANCCQ00597 558 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 TMCO3Q6UWJ1 677 aa17.05■□□□□ 0.32
CCNF-201ENST00000293968 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms