RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 TM6SF1Q9BZW5 370 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 HELLSQ9NRZ9 838 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 PDRG1Q9NUG6 133 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 LPIN2Q92539 896 aa20.04■□□□□ 0.8
HIF3A-203ENST00000291300 PIH1D3Q9NQM4 214 aaKnown RBP20.04■□□□□ 0.8
HIF3A-203ENST00000291300 TRIM37O94972 964 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 CHRNDQ07001 517 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 CHAMP1Q96JM3 812 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 FOXP2O15409 715 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 CYP21A2P08686 494 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
HIF3A-203ENST00000291300 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
HIF3A-203ENST00000291300 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
HIF3A-203ENST00000291300 SF3B3Q15393 1217 aaKnown RBP20.02■□□□□ 0.8
HIF3A-203ENST00000291300 KRT27Q7Z3Y8 459 aa20.02■□□□□ 0.8
HIF3A-203ENST00000291300 CELF1Q92879 486 aaKnown RBP20.02■□□□□ 0.8
HIF3A-203ENST00000291300 MYH7P12883 1935 aa20.02■□□□□ 0.8
HIF3A-203ENST00000291300 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.79
HIF3A-203ENST00000291300 ARID4AP29374 1257 aaPredicted RBP20.02■□□□□ 0.79
HIF3A-203ENST00000291300 SLC10A5Q5PT55 438 aa20.02■□□□□ 0.79
HIF3A-203ENST00000291300 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.79
HIF3A-203ENST00000291300 ZNF512BQ96KM6 892 aaPredicted RBP20.02■□□□□ 0.79
HIF3A-203ENST00000291300 PUS7LQ9H0K6 701 aaKnown RBP20.02■□□□□ 0.79
HIF3A-203ENST00000291300 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.79
HIF3A-203ENST00000291300 A0A1B0GUL6 1792 aa20.01■□□□□ 0.79
HIF3A-203ENST00000291300 HSPD1P10809 573 aaKnown RBP20.01■□□□□ 0.79
HIF3A-203ENST00000291300 ST3GAL1Q11201 340 aa20.01■□□□□ 0.79
HIF3A-203ENST00000291300 FOXD4L5Q5VV16 416 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-203ENST00000291300 SLC51AQ86UW1 340 aa20.01■□□□□ 0.79
HIF3A-203ENST00000291300 NBPF5PQ86XG9 351 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-203ENST00000291300 FOXD4L4Q8WXT5 416 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-203ENST00000291300 HMG20BQ9P0W2 317 aa20.01■□□□□ 0.79
HIF3A-203ENST00000291300 BCAMP50895 628 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 TSGA10IPQ3SY00 556 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 RNF20Q5VTR2 975 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 SLC5A1P13866 664 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 RFC4P35249 363 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 WASHC4Q2M389 1173 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 TRAPPC3LQ5T215 181 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 TTLL5Q6EMB2 1281 aa20■□□□□ 0.79
HIF3A-203ENST00000291300 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
HIF3A-203ENST00000291300 HSP90B1P14625 803 aaKnown RBP19.99■□□□□ 0.79
HIF3A-203ENST00000291300 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
HIF3A-203ENST00000291300 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
HIF3A-203ENST00000291300 TPCN1Q9ULQ1 816 aa19.99■□□□□ 0.79
HIF3A-203ENST00000291300 UBR3Q6ZT12 1888 aa19.99■□□□□ 0.79
HIF3A-203ENST00000291300 RGL2O15211 777 aa19.99■□□□□ 0.79
HIF3A-203ENST00000291300 RPS6KB1P23443 525 aa19.99■□□□□ 0.79
HIF3A-203ENST00000291300 TNRC6CQ9HCJ0 1690 aaKnown RBP19.99■□□□□ 0.79
HIF3A-203ENST00000291300 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
HIF3A-203ENST00000291300 NUCB2P80303 420 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 ME3Q16798 604 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 BLOC1S2Q6QNY1 142 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 CDC5LQ99459 802 aaKnown RBP19.98■□□□□ 0.79
HIF3A-203ENST00000291300 DSCC1Q9BVC3 393 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 WWC3Q9ULE0 1092 aa19.98■□□□□ 0.79
HIF3A-203ENST00000291300 BAG4O95429 457 aaKnown RBP19.97■□□□□ 0.79
HIF3A-203ENST00000291300 TOB2Q14106 344 aaPredicted RBP19.97■□□□□ 0.79
HIF3A-203ENST00000291300 NFIXQ14938 502 aa19.97■□□□□ 0.79
HIF3A-203ENST00000291300 PROM2Q8N271 834 aa19.97■□□□□ 0.79
HIF3A-203ENST00000291300 NECAB1Q8N987 351 aa19.97■□□□□ 0.79
HIF3A-203ENST00000291300 IDH1O75874 414 aaKnown RBP19.97■□□□□ 0.79
HIF3A-203ENST00000291300 CCDC83Q8IWF9 413 aa19.97■□□□□ 0.79
HIF3A-203ENST00000291300 IQSEC3Q9UPP2 1182 aaPredicted RBP19.97■□□□□ 0.79
HIF3A-203ENST00000291300 PSMA5P28066 241 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 ADD2P35612 726 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 GSE1Q14687 1217 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 TICAM2Q86XR7 235 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 SPATA5Q8NB90 893 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 APPBP2Q92624 585 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 NYXQ9GZU5 481 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 MINPP1Q9UNW1 487 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 UQCRFS1P1P0C7P4 283 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 GBP4Q96PP9 640 aa19.96■□□□□ 0.79
HIF3A-203ENST00000291300 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
HIF3A-203ENST00000291300 ZFYP08048 801 aaPredicted RBP19.95■□□□□ 0.78
HIF3A-203ENST00000291300 TM4SF1P30408 202 aa19.95■□□□□ 0.78
HIF3A-203ENST00000291300 TPTE2Q6XPS3 522 aa19.95■□□□□ 0.78
HIF3A-203ENST00000291300 NEK1Q96PY6 1258 aa19.95■□□□□ 0.78
HIF3A-203ENST00000291300 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
HIF3A-203ENST00000291300 TRAK2O60296 914 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 GYG1P46976 350 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 NLRP3Q96P20 1036 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 TCRBV5S4A2TA0A5A2 114 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 GPAA1O43292 621 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 KLRK1P26718 216 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 ZNF532Q9HCE3 1301 aa19.94■□□□□ 0.78
HIF3A-203ENST00000291300 BRD1O95696 1058 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 PDE6AP16499 860 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 DOCK2Q92608 1830 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 DDX11L8A8MPP1 907 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 HAND2P61296 217 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 IL27Q8NEV9 243 aa19.93■□□□□ 0.78
HIF3A-203ENST00000291300 COL1A1P02452 1464 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms