RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PTPN14Q15678 1187 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZNF444Q8N0Y2 327 aaPredicted RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 ANO10Q9NW15 660 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 CHGBP05060 677 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZNF589Q86UQ0 364 aaPredicted RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 DEF6Q9H4E7 631 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
UBR1-201ENST00000290650 MYOM2P54296 1465 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 RNF113AO15541 343 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 MBD4O95243 580 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 RPS6KB1P23443 525 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 WTAPQ15007 396 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 FAM98CQ17RN3 349 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 IQCA1Q86XH1 822 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 SNAP23O00161 211 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 HMGB1P09429 215 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 SFPQP23246 707 aaKnown RBP eCLIP5.53□□□□□ -1.52
UBR1-201ENST00000290650 IL15P40933 162 aaPredicted RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 CHMP4BP1P59074 171 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 SMIM5Q71RC9 77 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 SYNE4Q8N205 404 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ASAP1Q9ULH1 1129 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 MAPK8IP1Q9UQF2 711 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 SYKP43405 635 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 BEND3Q5T5X7 828 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 CATIPQ7Z7H3 387 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 CTCFLQ8NI51 663 aaPredicted RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 FTOQ9C0B1 505 aaKnown RBP eCLIP5.53□□□□□ -1.52
UBR1-201ENST00000290650 CENPHQ9H3R5 247 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 TPCN1Q9ULQ1 816 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 AXIN2Q9Y2T1 843 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 PPARDQ03181 441 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 IFIT1BQ5T764 474 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 TTC41PQ6P2S7 1318 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 FAM135BQ49AJ0 1406 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 PLEKHG3A1L390 1219 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 POLR3GO15318 223 aaPredicted RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 LARGE1O95461 756 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 TOP1P11387 765 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 EIF5P55010 431 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 HMGN5P82970 282 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 PDCL2Q8N4E4 241 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 CRACR2BQ8N4Y2 399 aaPredicted RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 STAMQ92783 540 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 DHX58Q96C10 678 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 MMRN2Q9H8L6 949 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 LRRC7Q96NW7 1537 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ARHGEF10O15013 1369 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ALKQ9UM73 1620 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 COBLO75128 1261 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 CALRP27797 417 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 STX1AQ16623 288 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 CCDC152Q4G0S7 254 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 NOM1Q5C9Z4 860 aaKnown RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 HEATR3Q7Z4Q2 680 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 AK7Q96M32 723 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ZHX1Q9UKY1 873 aaPredicted RBP5.53□□□□□ -1.52
UBR1-201ENST00000290650 PPP4R3BQ5MIZ7 849 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ANKRD18AQ8IVF6 992 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 HMG20BQ9P0W2 317 aa5.53□□□□□ -1.52
UBR1-201ENST00000290650 ANAPC15P60006 121 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 SETDB2Q96T68 719 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 USP6P35125 1406 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 TULP4Q9NRJ4 1543 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 UBAP1LF5GYI3 381 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 GPAA1O43292 621 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 MCM7P33993 719 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 ZNF76P36508 570 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 RTN1Q16799 776 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 LIG1P18858 919 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 NOLC1Q14978 699 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR1-201ENST00000290650 SPTY2D1Q68D10 685 aaPredicted RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 PLBD2Q8NHP8 589 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 UTP14AQ9BVJ6 771 aaKnown RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 SEC63Q9UGP8 760 aaKnown RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 KCNJ14Q9UNX9 436 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 PHKG2P15735 406 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 TEX35Q5T0J7 233 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 NAA16Q6N069 864 aaPredicted RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 DHX32Q7L7V1 743 aaKnown RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 RAD50Q92878 1312 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 SMARCE1Q969G3 411 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 NUP88Q99567 741 aaPredicted RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 MYO5BQ9ULV0 1848 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 NEO1Q92859 1461 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 GNPATO15228 680 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 PDCL3Q9H2J4 239 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 DDX19AQ9NUU7 478 aaKnown RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 AATFQ9NY61 560 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR1-201ENST00000290650 KIAA0232Q92628 1395 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 PCDH11XQ9BZA7 1347 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 PCDH11YQ9BZA8 1340 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 NR1I2O75469 434 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 IDEP14735 1019 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 KIAA1328Q86T90 577 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 SDR42E1Q8WUS8 393 aa5.52□□□□□ -1.53
UBR1-201ENST00000290650 CDC5LQ99459 802 aaKnown RBP5.52□□□□□ -1.53
UBR1-201ENST00000290650 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms