RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 NBPF7P0C2Y1 421 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CALM1P0DP23 149 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CALM2P0DP24 149 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CALM3P0DP25 149 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 NFIXQ14938 502 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 MCMDC2Q4G0Z9 681 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 NRDCO43847 1150 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 APPBP2Q92624 585 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
EPHA4-201ENST00000281821 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
EPHA4-201ENST00000281821 IKQ13123 557 aaPredicted RBP9.19□□□□□ -0.94
EPHA4-201ENST00000281821 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
EPHA4-201ENST00000281821 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 KBTBD3Q8NAB2 608 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 HMGN5P82970 282 aaKnown RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 TFCP2Q12800 502 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 SLC9C2Q5TAH2 1124 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 JMYQ8N9B5 988 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 XAGE2Q96GT9 111 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 GLT8D2Q9H1C3 349 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 ARHGEF6Q15052 776 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 TOPAZ1Q8N9V7 1692 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 KDM6AO15550 1401 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 RABL6Q3YEC7 729 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 ZNF219Q9P2Y4 722 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-201ENST00000281821 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
EPHA4-201ENST00000281821 UBE3CQ15386 1083 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 NCOA7Q8NI08 942 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 SF3A1Q15459 793 aaKnown RBP9.17□□□□□ -0.94
EPHA4-201ENST00000281821 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 RTL9Q8NET4 1388 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 FAM182BQ5T319 152 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 MFSD6Q6ZSS7 791 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 PROSER3Q2NL68 480 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 DISP2A7MBM2 1401 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 CHRNDQ07001 517 aa9.17□□□□□ -0.94
EPHA4-201ENST00000281821 TTLL12Q14166 644 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-201ENST00000281821 RPS12P25398 132 aaKnown RBP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 PABPC4Q13310 644 aaKnown RBP eCLIP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 ERFEQ4G0M1 354 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 POLA2Q14181 598 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 SUPT20HL1Q3ZLR7 823 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 USP48Q86UV5 1035 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 SPATA5Q8NB90 893 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 LINC00116Q8NCU8 138 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 ITPK1Q13572 414 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 CATIPQ7Z7H3 387 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 CLEC11AQ9Y240 323 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 RLBP1P12271 317 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 C20orf194Q5TEA3 1177 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 FEZ1Q99689 392 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 STAP2Q9UGK3 403 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
EPHA4-201ENST00000281821 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 ANKRD26Q9UPS8 1709 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 UTYO14607 1347 aa9.16□□□□□ -0.94
EPHA4-201ENST00000281821 SLKQ9H2G2 1235 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-201ENST00000281821 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 PRR5LQ6MZQ0 368 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 TEX11Q8IYF3 940 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
EPHA4-201ENST00000281821 ARPP21Q9UBL0 812 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-201ENST00000281821 ATP6V0A2Q9Y487 856 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 AKAP12Q02952 1782 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 RASSF8Q8NHQ8 419 aa9.15□□□□□ -0.94
EPHA4-201ENST00000281821 SEC63Q9UGP8 760 aaKnown RBP9.15□□□□□ -0.94
EPHA4-201ENST00000281821 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-201ENST00000281821 MCM5P33992 734 aa9.15□□□□□ -0.95
EPHA4-201ENST00000281821 MFSD14BQ5SR56 506 aa9.15□□□□□ -0.95
EPHA4-201ENST00000281821 MCTP2Q6DN12 878 aa9.15□□□□□ -0.95
EPHA4-201ENST00000281821 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.95
EPHA4-201ENST00000281821 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.95
EPHA4-201ENST00000281821 RAD21O60216 631 aa9.15□□□□□ -0.95
EPHA4-201ENST00000281821 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 CSF1RP07333 972 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 HOXA10P31260 410 aaPredicted RBP9.14□□□□□ -0.95
EPHA4-201ENST00000281821 RRP12Q5JTH9 1297 aaKnown RBP9.14□□□□□ -0.95
EPHA4-201ENST00000281821 GREM2Q9H772 168 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 ATP8A2Q9NTI2 1148 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 NEK4P51957 841 aa9.14□□□□□ -0.95
EPHA4-201ENST00000281821 PPP1R12BO60237 982 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms