RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 CTAGE5O15320 804 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 STARD3NLO95772 234 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 TYRO3Q06418 890 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 SCRN1Q12765 414 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 ITGB4P16144 1822 aa13.42□□□□□ -0.26
SIRPB1-202ENST00000279477 E7EWF7 191 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 JAK2O60674 1132 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 EVA1CP58658 441 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 TIMM10P62072 90 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 STOX1Q6ZVD7 989 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 LIG1P18858 919 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 HSPA2P54652 639 aa13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 IFIT5Q13325 482 aaKnown RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 R3HCC1Q9Y3T6 440 aaKnown RBP13.41□□□□□ -0.26
SIRPB1-202ENST00000279477 EVCP57679 992 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 APPBP2Q92624 585 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 SALL1Q9NSC2 1324 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 CSF1RP07333 972 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 ATRNO75882 1429 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 ARAP2Q8WZ64 1704 aa13.4□□□□□ -0.26
SIRPB1-202ENST00000279477 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 ZNF594Q96JF6 807 aaPredicted RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 PRIMPOLQ96LW4 560 aa13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
SIRPB1-202ENST00000279477 LRP5O75197 1615 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
SIRPB1-202ENST00000279477 M0R2C6 588 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 CARMIL3Q8ND23 1372 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
SIRPB1-202ENST00000279477 UQCRHLA0A096LP55 91 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 ANKRD18BA2A2Z9 1011 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 UQCRHP07919 91 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 CHGBP05060 677 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 CAMK4Q16566 473 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 METTL24Q5JXM2 366 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 NUP98P52948 1817 aa13.36□□□□□ -0.27
SIRPB1-202ENST00000279477 AKAP11Q9UKA4 1901 aa13.35□□□□□ -0.27
SIRPB1-202ENST00000279477 NR1I2O75469 434 aa13.35□□□□□ -0.27
SIRPB1-202ENST00000279477 STX1AQ16623 288 aa13.35□□□□□ -0.27
SIRPB1-202ENST00000279477 BRAPQ7Z569 592 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms