RNA–Protein interactions for RNA: ENST00000273739.9

SLIT2-201, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 5,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-201ENST00000273739 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
SLIT2-201ENST00000273739 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
SLIT2-201ENST00000273739 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
SLIT2-201ENST00000273739 CFAP45Q9UL16 551 aa14.22□□□□□ -0.13
SLIT2-201ENST00000273739 SMC2O95347 1197 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 MCM5P33992 734 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
SLIT2-201ENST00000273739 ATP8B2P98198 1209 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 KRT24Q2M2I5 525 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 SEPT11Q9NVA2 429 aaKnown RBP14.21□□□□□ -0.13
SLIT2-201ENST00000273739 RTL1A6NKG5 1358 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 HEATR3Q7Z4Q2 680 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
SLIT2-201ENST00000273739 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.13
SLIT2-201ENST00000273739 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
SLIT2-201ENST00000273739 OVOS2A0A0G2JMS6 1433 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 OVOS2A0A0J9YW53 1432 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 OVOS2Q6IE36 1432 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 IQCA1LA6NCM1 817 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 TCP10L2B9ZVM9 353 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 BACH1O14867 736 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.14
SLIT2-201ENST00000273739 KRT85P78386 507 aa14.21□□□□□ -0.14
SLIT2-201ENST00000273739 MBD3O95983 291 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 TAF12Q16514 161 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 GOPCQ9HD26 462 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 PTPRTO14522 1441 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 NAPAP54920 295 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 ZNHIT6Q9NWK9 470 aaKnown RBP14.2□□□□□ -0.14
SLIT2-201ENST00000273739 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 ABCC3O15438 1527 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 MAP3K15Q6ZN16 1313 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 NBPF7P0C2Y1 421 aaPredicted RBP14.2□□□□□ -0.14
SLIT2-201ENST00000273739 SMARCE1Q969G3 411 aa14.2□□□□□ -0.14
SLIT2-201ENST00000273739 TSG101Q99816 390 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
SLIT2-201ENST00000273739 CTSWP56202 376 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
SLIT2-201ENST00000273739 LUC7LQ9NQ29 371 aaKnown RBP14.19□□□□□ -0.14
SLIT2-201ENST00000273739 USP16Q9Y5T5 823 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 ADRA2BP18089 450 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 SP4Q02446 784 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 CLASP1Q7Z460 1538 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
SLIT2-201ENST00000273739 RPS6KA4O75676 772 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 CALM1P0DP23 149 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 CALM2P0DP24 149 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 CALM3P0DP25 149 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 HMGN5P82970 282 aaKnown RBP14.19□□□□□ -0.14
SLIT2-201ENST00000273739 GCKRQ14397 625 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 HMG20BQ9P0W2 317 aa14.19□□□□□ -0.14
SLIT2-201ENST00000273739 XDHP47989 1333 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
SLIT2-201ENST00000273739 C21orf2O43822 256 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 A0A1B0GUL7 405 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 CCNA1P78396 465 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 APBB1IPQ7Z5R6 666 aaPredicted RBP14.18□□□□□ -0.14
SLIT2-201ENST00000273739 SYCP3Q8IZU3 236 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 PREX2Q70Z35 1606 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 IREB2P48200 963 aaKnown RBP14.18□□□□□ -0.14
SLIT2-201ENST00000273739 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
SLIT2-201ENST00000273739 EP400NLQ6ZTU2 488 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 SLC26A6Q9BXS9 759 aa14.18□□□□□ -0.14
SLIT2-201ENST00000273739 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
SLIT2-201ENST00000273739 RAD17O75943 681 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 MBD4O95243 580 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 USP6P35125 1406 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 ZNF594Q96JF6 807 aaPredicted RBP14.17□□□□□ -0.14
SLIT2-201ENST00000273739 TCHPQ9BT92 498 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 M0QZ92 97 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 CCT2P78371 535 aaKnown RBP14.17□□□□□ -0.14
SLIT2-201ENST00000273739 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
SLIT2-201ENST00000273739 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLIT2-201ENST00000273739 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 PTPDC1A2A3K4 754 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 ZBTB43O43298 467 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 PARP1P09874 1014 aaKnown RBP14.16□□□□□ -0.14
SLIT2-201ENST00000273739 SCNN1DP51172 638 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 ZNF771Q7L3S4 317 aaPredicted RBP14.16□□□□□ -0.14
SLIT2-201ENST00000273739 TTC16Q8NEE8 873 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 SLC10A4Q96EP9 437 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
SLIT2-201ENST00000273739 LETM1O95202 739 aaPredicted RBP14.16□□□□□ -0.14
SLIT2-201ENST00000273739 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 PIGBQ92521 554 aa14.16□□□□□ -0.14
SLIT2-201ENST00000273739 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms