RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 IL13P35225 146 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 BIN1O00499 593 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
SMG9-201ENST00000270066 USP37Q86T82 979 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 C16orf45Q96MC5 204 aaPredicted RBP15.19■□□□□ 0.02
SMG9-201ENST00000270066 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
SMG9-201ENST00000270066 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
SMG9-201ENST00000270066 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 PLXNC1O60486 1568 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 CCDC174Q6PII3 467 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 KIF18AQ8NI77 898 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 LRRC2Q9BYS8 371 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 STAT6P42226 847 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 TNNI2P48788 182 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 BICD1Q96G01 975 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 ALS2CR12Q96Q35 445 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 TMEM2Q9UHN6 1383 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 PAFAH1B1P43034 410 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 HELBQ8NG08 1087 aaPredicted RBP15.18■□□□□ 0.02
SMG9-201ENST00000270066 ORAI2Q96SN7 254 aa15.18■□□□□ 0.02
SMG9-201ENST00000270066 UVSSAQ2YD98 709 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 MAP9Q49MG5 647 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 HELLSQ9NRZ9 838 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 GOLGA6L7A0A1B0GV03 622 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 DYNC1I1O14576 645 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
SMG9-201ENST00000270066 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 TTC6Q86TZ1 520 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 TNNT1P13805 278 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMG9-201ENST00000270066 ZNF165P49910 485 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 C16orf71Q8IYS4 520 aaPredicted RBP15.16■□□□□ 0.02
SMG9-201ENST00000270066 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 PDE8AO60658 829 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 CRACR2AQ9BSW2 395 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 SAMD9Q5K651 1589 aa15.16■□□□□ 0.02
SMG9-201ENST00000270066 SPDYE3A6NKU9 549 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 PPFIA3O75145 1194 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 EYA2O00167 538 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 USP8P40818 1118 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 MRPS27Q92552 414 aaKnown RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 RBM28Q9NW13 759 aaKnown RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 CALCOCO1Q9P1Z2 691 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 RRAGBQ5VZM2 374 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 TRMT1Q9NXH9 659 aaKnown RBP15.15■□□□□ 0.02
SMG9-201ENST00000270066 KRT2P35908 639 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 SNX21Q969T3 373 aa15.15■□□□□ 0.02
SMG9-201ENST00000270066 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 ITGA6P23229 1130 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 TCEANC2Q96MN5 208 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 GTPBP4Q9BZE4 634 aaKnown RBP15.14■□□□□ 0.01
SMG9-201ENST00000270066 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 URI1O94763 535 aaPredicted RBP15.14■□□□□ 0.01
SMG9-201ENST00000270066 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 GNA11P29992 359 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 SPAG1Q07617 926 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
SMG9-201ENST00000270066 NAP1L4Q99733 375 aaKnown RBP15.14■□□□□ 0.01
SMG9-201ENST00000270066 MAST3O60307 1309 aa15.14■□□□□ 0.01
SMG9-201ENST00000270066 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 ADCY5O95622 1261 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 ZNF830Q96NB3 372 aaPredicted RBP15.13■□□□□ 0.01
SMG9-201ENST00000270066 UFL1O94874 794 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 KRT13P13646 458 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
SMG9-201ENST00000270066 CTNNBL1Q8WYA6 563 aaPredicted RBP15.13■□□□□ 0.01
SMG9-201ENST00000270066 TBC1D5Q92609 795 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
SMG9-201ENST00000270066 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.13■□□□□ 0.014e-6■■□□□ 12.6
SMG9-201ENST00000270066 N4BP3O15049 544 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 PER1O15534 1290 aaPredicted RBP15.13■□□□□ 0.01
SMG9-201ENST00000270066 CTNNA2P26232 953 aa15.13■□□□□ 0.01
SMG9-201ENST00000270066 FAM89AQ96GI7 184 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms