RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ARAP2Q8WZ64 1704 aa27.66■■■□□ 2.02
RAB40B-201ENST00000269347 GPT2Q8TD30 523 aa27.65■■■□□ 2.02
RAB40B-201ENST00000269347 PSMA5P28066 241 aa27.65■■■□□ 2.02
RAB40B-201ENST00000269347 CCDC102BQ68D86 513 aa27.65■■■□□ 2.02
RAB40B-201ENST00000269347 PIH1D3Q9NQM4 214 aaKnown RBP27.65■■■□□ 2.02
RAB40B-201ENST00000269347 SRP68Q9UHB9 627 aaKnown RBP27.65■■■□□ 2.02
RAB40B-201ENST00000269347 NHSQ6T4R5 1651 aa27.64■■■□□ 2.02
RAB40B-201ENST00000269347 SYT1P21579 422 aa27.64■■■□□ 2.02
RAB40B-201ENST00000269347 HSPA1LP34931 641 aa27.64■■■□□ 2.02
RAB40B-201ENST00000269347 ERFEQ4G0M1 354 aa27.64■■■□□ 2.02
RAB40B-201ENST00000269347 PARP10Q53GL7 1025 aa27.64■■■□□ 2.02
RAB40B-201ENST00000269347 SBF2Q86WG5 1849 aa27.64■■■□□ 2.01
RAB40B-201ENST00000269347 SPATA31A6Q5VVP1 1343 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 GJB2P29033 226 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 BICDL1Q6ZP65 573 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 NEK1Q96PY6 1258 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 DDX49Q9Y6V7 483 aaKnown RBP27.63■■■□□ 2.01
RAB40B-201ENST00000269347 DSCC1Q9BVC3 393 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 GDPD2Q9HCC8 539 aa27.63■■■□□ 2.01
RAB40B-201ENST00000269347 TBC1D9BQ66K14 1250 aa27.62■■■□□ 2.01
RAB40B-201ENST00000269347 SCN7AQ01118 1682 aa27.62■■■□□ 2.01
RAB40B-201ENST00000269347 KLHL40Q2TBA0 621 aa27.62■■■□□ 2.01
RAB40B-201ENST00000269347 IL27Q8NEV9 243 aa27.62■■■□□ 2.01
RAB40B-201ENST00000269347 AK7Q96M32 723 aa27.62■■■□□ 2.01
RAB40B-201ENST00000269347 STK3Q13188 491 aa27.61■■■□□ 2.01
RAB40B-201ENST00000269347 SMC3Q9UQE7 1217 aa27.61■■■□□ 2.01
RAB40B-201ENST00000269347 CNTNAP4Q9C0A0 1308 aa27.61■■■□□ 2.01
RAB40B-201ENST00000269347 GOLGA6L22H0YM25 854 aa27.6■■■□□ 2.01
RAB40B-201ENST00000269347 ALDH8A1Q9H2A2 487 aaPredicted RBP27.6■■■□□ 2.01
RAB40B-201ENST00000269347 TAF1LQ8IZX4 1826 aa27.6■■■□□ 2.01
RAB40B-201ENST00000269347 ABCC12Q96J65 1359 aa27.6■■■□□ 2.01
RAB40B-201ENST00000269347 WASHC4Q2M389 1173 aa27.6■■■□□ 2.01
RAB40B-201ENST00000269347 SKOR2Q2VWA4 1001 aaPredicted RBP27.6■■■□□ 2.01
RAB40B-201ENST00000269347 ZSCAN31Q96LW9 406 aaPredicted RBP27.6■■■□□ 2.01
RAB40B-201ENST00000269347 SH2B1Q9NRF2 756 aaPredicted RBP27.6■■■□□ 2.01
RAB40B-201ENST00000269347 XRCC6P12956 609 aaKnown RBP eCLIP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 PUM3Q15397 648 aaKnown RBP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 Q6ZUG5 572 aa27.59■■■□□ 2.01
RAB40B-201ENST00000269347 CCDC24Q8N4L8 307 aa27.59■■■□□ 2.01
RAB40B-201ENST00000269347 GJD4Q96KN9 370 aaPredicted RBP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 RBM27Q9P2N5 1060 aaKnown RBP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 MROH5Q6ZUA9 1318 aa27.59■■■□□ 2.01
RAB40B-201ENST00000269347 A0A1B0GUL6 1792 aa27.59■■■□□ 2.01
RAB40B-201ENST00000269347 ARID4AP29374 1257 aaPredicted RBP27.59■■■□□ 2.01
RAB40B-201ENST00000269347 PANK2Q9BZ23 570 aa27.59■■■□□ 2.01
RAB40B-201ENST00000269347 STX6O43752 255 aa27.58■■■□□ 2.01
RAB40B-201ENST00000269347 LPIN2Q92539 896 aa27.58■■■□□ 2.01
RAB40B-201ENST00000269347 ZNF512BQ96KM6 892 aaPredicted RBP27.58■■■□□ 2.01
RAB40B-201ENST00000269347 AFF2P51816 1311 aa27.58■■■□□ 2.01
RAB40B-201ENST00000269347 NKX2-3Q8TAU0 364 aa27.58■■■□□ 2
RAB40B-201ENST00000269347 CERKQ8TCT0 537 aa27.58■■■□□ 2
RAB40B-201ENST00000269347 WWC3Q9ULE0 1092 aa27.58■■■□□ 2
RAB40B-201ENST00000269347 CCDC152Q4G0S7 254 aa27.57■■■□□ 2
RAB40B-201ENST00000269347 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
RAB40B-201ENST00000269347 CHST3Q7LGC8 479 aa27.57■■■□□ 2
RAB40B-201ENST00000269347 MPHOSPH8Q99549 860 aa27.57■■■□□ 2
RAB40B-201ENST00000269347 LY75O60449 1722 aa27.57■■■□□ 2
RAB40B-201ENST00000269347 E7EWF7 191 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 ZSCAN22P10073 491 aaPredicted RBP27.56■■■□□ 2
RAB40B-201ENST00000269347 MTMR6Q9Y217 621 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 WDR33Q9C0J8 1336 aaKnown RBP27.56■■■□□ 2
RAB40B-201ENST00000269347 GOLGA6L3A6NEY3 463 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 HAND2P61296 217 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 RASGRF1Q13972 1273 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 APPBP2Q92624 585 aa27.56■■■□□ 2
RAB40B-201ENST00000269347 GADD45BO75293 160 aaPredicted RBP27.55■■■□□ 2
RAB40B-201ENST00000269347 ADD2P35612 726 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 KRT32Q14532 448 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 CAVIN1Q6NZI2 390 aaKnown RBP27.55■■■□□ 2
RAB40B-201ENST00000269347 RTL9Q8NET4 1388 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 GNPATO15228 680 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 NCLP19338 710 aaKnown RBP27.55■■■□□ 2
RAB40B-201ENST00000269347 BCAMP50895 628 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 CHRNDQ07001 517 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 TICAM2Q86XR7 235 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 CCNL1Q9UK58 526 aaPredicted RBP27.55■■■□□ 2
RAB40B-201ENST00000269347 ZNF652Q9Y2D9 606 aa27.55■■■□□ 2
RAB40B-201ENST00000269347 GPAA1O43292 621 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 FGAP02671 866 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 PTMSP20962 102 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 EXOSC10Q01780 885 aaKnown RBP27.54■■■□□ 2
RAB40B-201ENST00000269347 BRF1Q92994 677 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 GPHNQ9NQX3 736 aaPredicted RBP27.54■■■□□ 2
RAB40B-201ENST00000269347 DENND2AQ9ULE3 1009 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 DOCK2Q92608 1830 aa27.54■■■□□ 2
RAB40B-201ENST00000269347 RPS6KA4O75676 772 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 SLC9C2Q5TAH2 1124 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 SLC51AQ86UW1 340 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 TCRBV5S4A2TA0A5A2 114 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 JAK2O60674 1132 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 IDH1O75874 414 aaKnown RBP27.53■■■□□ 2
RAB40B-201ENST00000269347 MEX3CQ5U5Q3 659 aaKnown RBP27.53■■■□□ 2
RAB40B-201ENST00000269347 CNPY2Q9Y2B0 182 aa27.53■■■□□ 2
RAB40B-201ENST00000269347 C4AP0C0L4 1744 aa27.52■■■□□ 2
RAB40B-201ENST00000269347 C4BP0C0L5 1744 aa27.52■■■□□ 2
RAB40B-201ENST00000269347 F13A1P00488 732 aa27.52■■■□□ 2
RAB40B-201ENST00000269347 ZFYP08048 801 aaPredicted RBP27.52■■■□□ 2
RAB40B-201ENST00000269347 TMEM63CQ9P1W3 806 aa27.52■■■□□ 2
RAB40B-201ENST00000269347 NARFQ9UHQ1 456 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms