RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-201ENST00000269318 MPHOSPH8Q99549 860 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 COL4A1P02462 1669 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 M0R2C6 588 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 BRD1O95696 1058 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 CYP21A2P08686 494 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 KRT32Q14532 448 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 TBC1D9BQ66K14 1250 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 CCDC102BQ68D86 513 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 OSBP2Q969R2 916 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 GNPATO15228 680 aa19.87■□□□□ 0.77
CCDC40-201ENST00000269318 PTMSP20962 102 aa19.87■□□□□ 0.77
CCDC40-201ENST00000269318 ZSCAN31Q96LW9 406 aaPredicted RBP19.87■□□□□ 0.77
CCDC40-201ENST00000269318 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
CCDC40-201ENST00000269318 HSPD1P10809 573 aaKnown RBP19.86■□□□□ 0.77
CCDC40-201ENST00000269318 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
CCDC40-201ENST00000269318 PHKA1P46020 1223 aa19.86■□□□□ 0.77
CCDC40-201ENST00000269318 SF3B3Q15393 1217 aaKnown RBP19.86■□□□□ 0.77
CCDC40-201ENST00000269318 AMIGO3Q86WK7 504 aa19.86■□□□□ 0.77
CCDC40-201ENST00000269318 SH2B1Q9NRF2 756 aaPredicted RBP19.86■□□□□ 0.77
CCDC40-201ENST00000269318 SLC10A5Q5PT55 438 aa19.86■□□□□ 0.77
CCDC40-201ENST00000269318 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
CCDC40-201ENST00000269318 SRP68Q9UHB9 627 aaKnown RBP19.86■□□□□ 0.77
CCDC40-201ENST00000269318 UQCRFS1P1P0C7P4 283 aa19.85■□□□□ 0.77
CCDC40-201ENST00000269318 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
CCDC40-201ENST00000269318 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
CCDC40-201ENST00000269318 SLC5A1P13866 664 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 ST3GAL1Q11201 340 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 APPBP2Q92624 585 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-201ENST00000269318 CASZ1Q86V15 1759 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 MYH7P12883 1935 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 GOLGA6L22H0YM25 854 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 TOB2Q14106 344 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-201ENST00000269318 ME3Q16798 604 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 BICDL1Q6ZP65 573 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 NEK1Q96PY6 1258 aa19.84■□□□□ 0.77
CCDC40-201ENST00000269318 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-201ENST00000269318 SNAP23O00161 211 aa19.83■□□□□ 0.77
CCDC40-201ENST00000269318 FOXP2O15409 715 aa19.83■□□□□ 0.77
CCDC40-201ENST00000269318 ANKRD1Q15327 319 aa19.83■□□□□ 0.77
CCDC40-201ENST00000269318 TTF1Q15361 905 aaPredicted RBP19.83■□□□□ 0.77
CCDC40-201ENST00000269318 CDC5LQ99459 802 aaKnown RBP19.83■□□□□ 0.77
CCDC40-201ENST00000269318 PIH1D3Q9NQM4 214 aaKnown RBP19.83■□□□□ 0.77
CCDC40-201ENST00000269318 STOX1Q6ZVD7 989 aa19.83■□□□□ 0.76
CCDC40-201ENST00000269318 ARHGEF1Q92888 912 aaKnown RBP19.83■□□□□ 0.76
CCDC40-201ENST00000269318 TCEANC2Q96MN5 208 aa19.83■□□□□ 0.76
CCDC40-201ENST00000269318 QTRT2Q9H974 415 aaKnown RBP19.83■□□□□ 0.76
CCDC40-201ENST00000269318 ZPR1O75312 459 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 ADD2P35612 726 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 CHRNDQ07001 517 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 WASHC4Q2M389 1173 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 SKOR2Q2VWA4 1001 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-201ENST00000269318 CCDC83Q8IWF9 413 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC40-201ENST00000269318 NYXQ9GZU5 481 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 PUS7LQ9H0K6 701 aaKnown RBP19.82■□□□□ 0.76
CCDC40-201ENST00000269318 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
CCDC40-201ENST00000269318 MCTP1Q6DN14 999 aa19.81■□□□□ 0.76
CCDC40-201ENST00000269318 SETDB2Q96T68 719 aa19.81■□□□□ 0.76
CCDC40-201ENST00000269318 ZSCAN25Q6NSZ9 544 aa19.81■□□□□ 0.76
CCDC40-201ENST00000269318 A0A1B0GUL6 1792 aa19.8■□□□□ 0.76
CCDC40-201ENST00000269318 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
CCDC40-201ENST00000269318 SPATA5Q8NB90 893 aa19.8■□□□□ 0.76
CCDC40-201ENST00000269318 SMC3Q9UQE7 1217 aa19.8■□□□□ 0.76
CCDC40-201ENST00000269318 RASGRF1Q13972 1273 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 UBE3CQ15386 1083 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 ANKRD18AQ8IVF6 992 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 LMBRD1Q9NUN5 540 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 WDR33Q9C0J8 1336 aaKnown RBP19.79■□□□□ 0.76
CCDC40-201ENST00000269318 HMGB1P09429 215 aaKnown RBP19.79■□□□□ 0.76
CCDC40-201ENST00000269318 SLC9C2Q5TAH2 1124 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
CCDC40-201ENST00000269318 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
CCDC40-201ENST00000269318 BSDC1Q9NW68 430 aaPredicted RBP19.79■□□□□ 0.76
CCDC40-201ENST00000269318 LAMA4Q16363 1823 aa19.79■□□□□ 0.76
CCDC40-201ENST00000269318 MYO5AQ9Y4I1 1855 aaKnown RBP19.78■□□□□ 0.76
CCDC40-201ENST00000269318 GPAA1O43292 621 aa19.78■□□□□ 0.76
CCDC40-201ENST00000269318 GTF2E1P29083 439 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-201ENST00000269318 NBPF5PQ86XG9 351 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-201ENST00000269318 GZF1Q9H116 711 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-201ENST00000269318 DOCK2Q92608 1830 aa19.78■□□□□ 0.76
CCDC40-201ENST00000269318 TCRBV5S4A2TA0A5A2 114 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 E7EWF7 191 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 TTLL5Q6EMB2 1281 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 FAM196AQ6ZSG2 479 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 TAF1P21675 1872 aa19.77■□□□□ 0.76
CCDC40-201ENST00000269318 IDH1O75874 414 aaKnown RBP19.77■□□□□ 0.75
CCDC40-201ENST00000269318 PDE6AP16499 860 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 SYT1P21579 422 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 GJB2P29033 226 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 BCAMP50895 628 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.75
CCDC40-201ENST00000269318 CTNNA3Q9UI47 895 aa19.77■□□□□ 0.75
CCDC40-201ENST00000269318 WWC3Q9ULE0 1092 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms