RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
SCAF11-201ENST00000266589 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
SCAF11-201ENST00000266589 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
SCAF11-201ENST00000266589 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
SCAF11-201ENST00000266589 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-201ENST00000266589 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
SCAF11-201ENST00000266589 LRRFIP1Q32MZ4 808 aaKnown RBP13.89□□□□□ -0.19
SCAF11-201ENST00000266589 ZMYM1Q5SVZ6 1142 aa13.89□□□□□ -0.19
SCAF11-201ENST00000266589 KCNB2Q92953 911 aa13.89□□□□□ -0.19
SCAF11-201ENST00000266589 HELLSQ9NRZ9 838 aa13.89□□□□□ -0.19
SCAF11-201ENST00000266589 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-201ENST00000266589 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
SCAF11-201ENST00000266589 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-201ENST00000266589 MCM2P49736 904 aa13.88□□□□□ -0.19
SCAF11-201ENST00000266589 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
SCAF11-201ENST00000266589 MYO5AQ9Y4I1 1855 aaKnown RBP13.88□□□□□ -0.19
SCAF11-201ENST00000266589 MAST3O60307 1309 aa13.88□□□□□ -0.19
SCAF11-201ENST00000266589 SLC27A2O14975 620 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 DDIT3P35638 169 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-201ENST00000266589 ADCK5Q3MIX3 580 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
SCAF11-201ENST00000266589 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
SCAF11-201ENST00000266589 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
SCAF11-201ENST00000266589 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCAF11-201ENST00000266589 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 M0R2C6 588 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 TM4SF1P30408 202 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 BCAMP50895 628 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 RASGRF1Q13972 1273 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 OSBP2Q969R2 916 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
SCAF11-201ENST00000266589 PIH1D3Q9NQM4 214 aaKnown RBP13.86□□□□□ -0.19
SCAF11-201ENST00000266589 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-201ENST00000266589 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-201ENST00000266589 SERPINB2P05120 415 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 CPA1P15085 419 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 ST5P78524 1137 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 TTC14Q96N46 770 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
SCAF11-201ENST00000266589 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 ZSCAN25Q6NSZ9 544 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 APPBP2Q92624 585 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 DSCC1Q9BVC3 393 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-201ENST00000266589 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-201ENST00000266589 IDH1O75874 414 aaKnown RBP13.84□□□□□ -0.19
SCAF11-201ENST00000266589 DDR1Q08345 913 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
SCAF11-201ENST00000266589 POLRMTO00411 1230 aaKnown RBP13.83□□□□□ -0.2
SCAF11-201ENST00000266589 HSPD1P10809 573 aaKnown RBP13.83□□□□□ -0.2
SCAF11-201ENST00000266589 ADD2P35612 726 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 SLC9C2Q5TAH2 1124 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 TAF6LQ9Y6J9 622 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 PSMA5P28066 241 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 GYG1P46976 350 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 AK2P54819 239 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 GRAPQ13588 217 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 RUFY3Q7L099 469 aa13.83□□□□□ -0.2
SCAF11-201ENST00000266589 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-201ENST00000266589 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-201ENST00000266589 PUS7LQ9H0K6 701 aaKnown RBP13.83□□□□□ -0.2
SCAF11-201ENST00000266589 ZNF804BA4D1E1 1349 aa13.82□□□□□ -0.2
SCAF11-201ENST00000266589 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-201ENST00000266589 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
SCAF11-201ENST00000266589 ZGPATQ8N5A5 531 aaKnown RBP13.82□□□□□ -0.2
SCAF11-201ENST00000266589 RPGRQ92834 1020 aaKnown RBP13.82□□□□□ -0.2
SCAF11-201ENST00000266589 PDRG1Q9NUG6 133 aa13.82□□□□□ -0.2
SCAF11-201ENST00000266589 CYP21A2P08686 494 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 PDE6AP16499 860 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 CUL4AQ13619 759 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 KRT32Q14532 448 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 GNL3LQ9NVN8 582 aaKnown RBP13.81□□□□□ -0.2
SCAF11-201ENST00000266589 WWC3Q9ULE0 1092 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-201ENST00000266589 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 GPAA1O43292 621 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 CRY2Q49AN0 593 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms