RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-201ENST00000265379 SDSP20132 328 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 CWC27Q6UX04 472 aaKnown RBP9.48□□□□□ -0.89
COL6A5-201ENST00000265379 TCHPQ9BT92 498 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 ZNF213O14771 459 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 RCAN1P53805 252 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 HOOK2Q96ED9 719 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 FAM107BQ9H098 131 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 SH3TC1Q8TE82 1336 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 PPP1R12BO60237 982 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-201ENST00000265379 ERLIN1O75477 346 aa9.48□□□□□ -0.89
COL6A5-201ENST00000265379 COPRSQ9NQ92 184 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 RNF113AO15541 343 aaKnown RBP9.47□□□□□ -0.89
COL6A5-201ENST00000265379 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
COL6A5-201ENST00000265379 STX1AQ16623 288 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 XAGE3Q8WTP9 111 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 ANKRD12Q6UB98 2062 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 EYA2O00167 538 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 SSFA2P28290 1259 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 AMPD3Q01432 767 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 RAB3GAP1Q15042 981 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 ZSCAN30Q86W11 494 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 SLC12A7Q9Y666 1083 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 WDR19Q8NEZ3 1342 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 LMTK3Q96Q04 1460 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 TUBBP07437 444 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
COL6A5-201ENST00000265379 NEK1Q96PY6 1258 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 EYA3Q99504 573 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
COL6A5-201ENST00000265379 TNIP1Q15025 636 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 TMEM266Q2M3C6 531 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 TPTE2Q6XPS3 522 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 TBC1D22AQ8WUA7 517 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
COL6A5-201ENST00000265379 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
COL6A5-201ENST00000265379 NEBLO76041 1014 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 ZSCAN12O43309 604 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 ME1P48163 572 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 PPFIBP1Q86W92 1011 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 GOLIM4O00461 696 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 NUMA1Q14980 2115 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 CCDC83Q8IWF9 413 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 CTAGE1Q96RT6 745 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 DENND2AQ9ULE3 1009 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 ZNF142P52746 1687 aaPredicted RBP9.46□□□□□ -0.89
COL6A5-201ENST00000265379 HLA-DOAP06340 250 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 ATP5JP18859 108 aa9.46□□□□□ -0.89
COL6A5-201ENST00000265379 PUM3Q15397 648 aaKnown RBP9.46□□□□□ -0.89
COL6A5-201ENST00000265379 PAG1Q9NWQ8 432 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 POLR3GO15318 223 aaPredicted RBP9.46□□□□□ -0.9
COL6A5-201ENST00000265379 SLC4A3P48751 1232 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 MFSD6Q6ZSS7 791 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 MEIS3Q99687 375 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 STXBP4Q6ZWJ1 553 aa9.46□□□□□ -0.9
COL6A5-201ENST00000265379 RRP9O43818 475 aaKnown RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 ZSCAN22P10073 491 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 NAA16Q6N069 864 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 TEX2Q8IWB9 1127 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 STAMBPO95630 424 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 RBM26Q5T8P6 1007 aaKnown RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 RAI14Q9P0K7 980 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 CHMLP26374 656 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 TAX1BP1Q86VP1 789 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 NBPF7P0C2Y1 421 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 MICAL3Q7RTP6 2002 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 FKBP4Q02790 459 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 DZIP1Q86YF9 867 aaKnown RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-201ENST00000265379 GCKRQ14397 625 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 CCDC150Q8NCX0 1101 aa9.45□□□□□ -0.9
COL6A5-201ENST00000265379 FAM193AP78312 1265 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 IGHDP01880 384 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 SEMA3FQ13275 785 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 C1orf167Q5SNV9 1468 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
COL6A5-201ENST00000265379 hCG_1984214I3L0E3 225 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
COL6A5-201ENST00000265379 PHKG2P15735 406 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 ZNF713Q8N859 430 aaPredicted RBP9.44□□□□□ -0.9
COL6A5-201ENST00000265379 SGSM2O43147 1006 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 PCCAP05165 728 aaPredicted RBP9.44□□□□□ -0.9
COL6A5-201ENST00000265379 SSRP1Q08945 709 aaKnown RBP9.44□□□□□ -0.9
COL6A5-201ENST00000265379 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
COL6A5-201ENST00000265379 COPS6Q7L5N1 327 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms