RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 NAP1L1P55209 391 aaKnown RBP18.69■□□□□ 0.58
GPC1-201ENST00000264039 ZNF827Q17R98 1081 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
GPC1-201ENST00000264039 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 ZEB2O60315 1214 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 SSBP05455 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
GPC1-201ENST00000264039 GOLIM4O00461 696 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 EBAG9O00559 213 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 N4BP1O75113 896 aaKnown RBP18.68■□□□□ 0.58
GPC1-201ENST00000264039 CCDC175P0C221 793 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 MYL5Q02045 173 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 FOXR1Q6PIV2 292 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 DHX40Q8IX18 779 aaKnown RBP18.68■□□□□ 0.58
GPC1-201ENST00000264039 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 CEP57Q86XR8 500 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 FAM204AQ9H8W3 233 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
GPC1-201ENST00000264039 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 USP8P40818 1118 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 PNOCQ13519 176 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 SASH3O75995 380 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 FILIP1LQ4L180 1135 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 JMYQ8N9B5 988 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 CCDC85AQ96PX6 553 aaPredicted RBP18.67■□□□□ 0.58
GPC1-201ENST00000264039 MAP2K2P36507 400 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 CCDC91Q7Z6B0 441 aa18.67■□□□□ 0.58
GPC1-201ENST00000264039 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
GPC1-201ENST00000264039 SCRN1Q12765 414 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 GUCA1BQ9UMX6 200 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 TADA3O75528 432 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 EXOC4Q96A65 974 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 CLIC4Q9Y696 253 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 ARHGAP6O43182 974 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 CHGBP05060 677 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 CCT5P48643 541 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 MED14O60244 1454 aa18.66■□□□□ 0.58
GPC1-201ENST00000264039 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
GPC1-201ENST00000264039 ERLIN2O94905 339 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
GPC1-201ENST00000264039 CDR1P51861 262 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 NECTIN1Q15223 517 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 SARM1Q6SZW1 724 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 EP400NLQ6ZTU2 488 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
GPC1-201ENST00000264039 FAM212AQ96EL1 285 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
GPC1-201ENST00000264039 RESTQ13127 1097 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 CTAGE9A4FU28 777 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 GOLGA6L9A6NEM1 432 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 TDO2P48775 406 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 CCDC102BQ68D86 513 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 GPIHBP1Q8IV16 184 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 DPF2Q92785 391 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 ABCB6Q9NP58 842 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 KIF24Q5T7B8 1368 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 TTC41PQ6P2S7 1318 aa18.65■□□□□ 0.58
GPC1-201ENST00000264039 KLF18A0A0U1RQI7 1052 aa18.64■□□□□ 0.58
GPC1-201ENST00000264039 AFMP43652 599 aa18.64■□□□□ 0.58
GPC1-201ENST00000264039 SF3A3Q12874 501 aaKnown RBP eCLIP18.64■□□□□ 0.58
GPC1-201ENST00000264039 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.58
GPC1-201ENST00000264039 AFAP1L1Q8TED9 768 aa18.64■□□□□ 0.58
GPC1-201ENST00000264039 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.58
GPC1-201ENST00000264039 CDC42BPAQ5VT25 1732 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
GPC1-201ENST00000264039 KCNG4Q8TDN1 519 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
GPC1-201ENST00000264039 TXLNAP40222 546 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 NFE2L3Q9Y4A8 694 aa18.64■□□□□ 0.57
GPC1-201ENST00000264039 ST3GAL1Q11201 340 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 MAP4K1Q92918 833 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 BTBD11A6QL63 1104 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
GPC1-201ENST00000264039 MICU3Q86XE3 530 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 TICAM2Q86XR7 235 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 SAMM50Q9Y512 469 aa18.63■□□□□ 0.57
GPC1-201ENST00000264039 TULP2O00295 520 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 COBLO75128 1261 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
GPC1-201ENST00000264039 NLRP12P59046 1061 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
GPC1-201ENST00000264039 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 RABGGTAQ92696 567 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 A0A0G2JS52 829 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 H3BQF6 201 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 TUBB4AP04350 444 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 TOGARAM2Q6ZUX3 1019 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 KIAA1328Q86T90 577 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
GPC1-201ENST00000264039 MAGEA9P43362 315 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms