RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 HLTFQ14527 1009 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPG11-201ENST00000261866 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 SORBS3O60504 671 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 TIMM10P62072 90 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 USP21Q9UK80 565 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 SPDYE3A6NKU9 549 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
SPG11-201ENST00000261866 SYKP43405 635 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 MAP3K5Q99683 1374 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 ITGA6P23229 1130 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 ASIC1P78348 528 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
SPG11-201ENST00000261866 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 MBD4O95243 580 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
SPG11-201ENST00000261866 CEP63Q96MT8 703 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 JADE2Q9NQC1 790 aa13.9□□□□□ -0.18
SPG11-201ENST00000261866 STX1AQ16623 288 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 USO1O60763 962 aaKnown RBP13.89□□□□□ -0.19
SPG11-201ENST00000261866 HOOK3Q86VS8 718 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 DDX39AO00148 427 aaKnown RBP13.89□□□□□ -0.19
SPG11-201ENST00000261866 BACH1O14867 736 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
SPG11-201ENST00000261866 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 ZSCAN12O43309 604 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 N4BP3O15049 544 aa13.89□□□□□ -0.19
SPG11-201ENST00000261866 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 STX17P56962 302 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
SPG11-201ENST00000261866 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 ADCY5O95622 1261 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
SPG11-201ENST00000261866 PRDM1O75626 825 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 AATFQ9NY61 560 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPG11-201ENST00000261866 FLT4P35916 1363 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
SPG11-201ENST00000261866 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
SPG11-201ENST00000261866 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 APBB1IPQ7Z5R6 666 aaPredicted RBP13.87□□□□□ -0.19
SPG11-201ENST00000261866 GPIHBP1Q8IV16 184 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 A0A1W2PP64 1363 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
SPG11-201ENST00000261866 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 EYA3Q99504 573 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 GOLGA6L7A0A1B0GV03 622 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
SPG11-201ENST00000261866 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
SPG11-201ENST00000261866 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.19
SPG11-201ENST00000261866 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 FAM13AO94988 1023 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 ZFYP08048 801 aaPredicted RBP13.86□□□□□ -0.19
SPG11-201ENST00000261866 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
SPG11-201ENST00000261866 CCDC91Q7Z6B0 441 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 ZNF518AQ6AHZ1 1483 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 ALDH1L1O75891 902 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 MYCLP12524 364 aaPredicted RBP13.86□□□□□ -0.19
SPG11-201ENST00000261866 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 USH1GQ495M9 461 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
SPG11-201ENST00000261866 RLBP1P12271 317 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 GRIPAP1Q4V328 841 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 B4E1Z4 1266 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 KRT13P13646 458 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 KRT2P35908 639 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ZNF165P49910 485 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ANO6Q4KMQ2 910 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 IP6K1Q92551 441 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 EEF2P13639 858 aaKnown RBP13.85□□□□□ -0.19
SPG11-201ENST00000261866 PAFAH1B1P43034 410 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ZNF174Q15697 407 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 SPECC1Q5M775 1068 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 TBC1D5Q92609 795 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
SPG11-201ENST00000261866 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 CTAGE5O15320 804 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 RNF187Q5TA31 235 aaPredicted RBP13.85□□□□□ -0.19
SPG11-201ENST00000261866 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 ESPNB1AK53 854 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms