RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CHAMP1Q96JM3 812 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF76P36508 570 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 MKNK2Q9HBH9 465 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 STARD3NLO95772 234 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 BAG1Q99933 345 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 TACC1O75410 805 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF75DP51815 510 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 CTAGE1Q96RT6 745 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 CBX8Q9HC52 389 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 NUP153P49790 1475 aaKnown RBP11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 TEX14Q8IWB6 1497 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 PKP1Q13835 747 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 KANK3Q6NY19 840 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 SPTLC2O15270 562 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 BUB1BO60566 1050 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 SYCP2Q9BX26 1530 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF500O60304 480 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 KDM5BQ9UGL1 1544 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 GRM8O00222 908 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 STAMBPO95630 424 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CHMP4BP1P59074 171 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 CATIPQ7Z7H3 387 aa11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 EIF2AK4Q9P2K8 1649 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-201ENST00000260327 ARID5AQ03989 594 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 CFAP58Q5T655 872 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 HGSO14964 777 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 GOLGA6CA6NDK9 693 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 GOLGA6DP0CG33 693 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 PPP1R9BQ96SB3 815 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 MMRN2Q9H8L6 949 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 GOLGA6AQ9NYA3 693 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 PTPDC1A2A3K4 754 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 FAM114A1Q8IWE2 563 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 MYCBPQ99417 103 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 A0A1W2PP64 1363 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 KRT86O43790 486 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 KIF5AQ12840 1032 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 DHX58Q96C10 678 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 B4GALNT4Q76KP1 1039 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZBTB43O43298 467 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 KRT13P13646 458 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 POTEDQ86YR6 584 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 SAMD15Q9P1V8 674 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ERCC6LQ2NKX8 1250 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 GDAP1L1Q96MZ0 367 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 FANCAO15360 1455 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ATP10BO94823 1461 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 SOS1Q07889 1333 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 RXRAP19793 462 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 VAV2P52735 878 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 RBM5P52756 815 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 RNF41Q9H4P4 317 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 SLC5A1P13866 664 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 CTNNA2P26232 953 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZSCAN29Q8IWY8 852 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 MPHOSPH10O00566 681 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 PCK1P35558 622 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 UBXN1Q04323 297 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 CAVIN4Q5BKX8 364 aa11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-201ENST00000260327 TTC41PQ6P2S7 1318 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 LONRF3Q496Y0 759 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 LAMC3Q9Y6N6 1575 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 UBA7P41226 1012 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 KCNK9Q9NPC2 374 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms